tRNA genes clustered and arranged according to each identical group

Acidithiobacillia

Anticodon = GGG

HIT: 4 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.248424 (7 seq.)
>W1711190344	LWRZ01000058	Acidithiobacillia	Acidithiobacillus thiooxidans [LWRZ]	6296	6373	+	Pro	GGG	[ENA]	○
>W1711190464	LWSA01000290	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSA]	6878	6801	-	Pro	GGG	[ENA]	○
>W1711190527	LWSB01000089	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSB]	9769	9846	+	Pro	GGG	[ENA]	○
>W1711190737	LWSD01000267	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSD]	7317	7394	+	Pro	GGG	[ENA]	○
>W1711293146	LZYI01000014	Acidithiobacillia	Acidithiobacillus thiooxidans [LZYI]	6896	6819	-	Pro	GGG	[ENA]	○
>W141206752	AZMO01000001	Acidithiobacillia	Acidithiobacillus thiooxidans A01 [AZMO]	139058	139135	+	Pro	GGG	[ENA]	○
>W141695581	JMEB01000106	Acidithiobacillia	Acidithiobacillus thiooxidans [JMEB]	13986	13909	-	Pro	GGG	[ENA]	○
Identical group No.276695 (88 seq.)
>W1710777662	LJBT01000093	Acidithiobacillia	Acidithiobacillus ferrooxidans [LJBT]	68070	68146	+	Pro	GGG	[ENA]	○
>W1711010469	LQRJ01000035	Acidithiobacillia	Acidithiobacillus ferrooxidans [LQRJ]	98088	98164	+	Pro	GGG	[ENA]	○
>W1711088376	LSYU01000110	Gammaproteobacteria	Marichromatium gracile [LSYU]	109722	109798	+	Pro	GGG	[ENA]	○
>W1711168353	LVXZ01000110	Acidithiobacillia	Acidithiobacillus ferrooxidans [LVXZ]	33625	33701	+	Pro	GGG	[ENA]	○
>W1711169884	LVZL01000067	Acidithiobacillia	Acidithiobacillus ferrivorans [LVZL]	46860	46784	-	Pro	GGG	[ENA]	○
>W1711190239	LWRY01000028	Acidithiobacillia	Acidithiobacillus thiooxidans [LWRY]	1586	1510	-	Pro	GGG	[ENA]	○
>W1711190377	LWRZ01000225	Acidithiobacillia	Acidithiobacillus thiooxidans [LWRZ]	1568	1492	-	Pro	GGG	[ENA]	○
>W1711190437	LWSA01000151	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSA]	1582	1506	-	Pro	GGG	[ENA]	○
>W1711190500	LWSB01000041	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSB]	7272	7348	+	Pro	GGG	[ENA]	○
>W1711190638	LWSC01000277	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSC]	51896	51972	+	Pro	GGG	[ENA]	○
>W1711190703	LWSD01000189	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSD]	1551	1475	-	Pro	GGG	[ENA]	○
>W1711220192	LXQG01000054	Acidithiobacillia	Acidithiobacillus caldus [LXQG]	36433	36509	+	Pro	GGG	[ENA]	○
>W1711292949	LZYE01000004	Acidithiobacillia	Acidithiobacillus caldus [LZYE]	29403	29327	-	Pro	GGG	[ENA]	○
>W1711292993	LZYF01000005	Acidithiobacillia	Acidithiobacillus caldus [LZYF]	1771	1695	-	Pro	GGG	[ENA]	○
>W1711293050	LZYG01000078	Acidithiobacillia	Acidithiobacillus caldus [LZYG]	13829	13905	+	Pro	GGG	[ENA]	○
>W1711293088	LZYH01000396	Acidithiobacillia	Acidithiobacillus caldus [LZYH]	1901	1977	+	Pro	GGG	[ENA]	○
>W1711293164	LZYI01000062	Acidithiobacillia	Acidithiobacillus thiooxidans [LZYI]	3750	3674	-	Pro	GGG	[ENA]	○
>W1711312159	MASQ01000076	Acidithiobacillia	Acidithiobacillus ferrivorans [MASQ]	35002	35078	+	Pro	GGG	[ENA]	○
>W1711351172	MDCF01000119	Gammaproteobacteria	Acidiferrobacter thiooxydans [MDCF]	33925	34001	+	Pro	GGG	[ENA]	○
>W1711388830	MEID01000094	Gammaproteobacteria	Ectothiorhodospiraceae bacterium AqS1 [MEID]	1468	1544	+	Pro	GGG	[ENA]	○
>W1711585805	MOAD01000001	Acidithiobacillia	Acidithiobacillus albertensis [MOAD]	532838	532914	+	Pro	GGG	[ENA]	○
>W131164829	ARBC01000016	Gammaproteobacteria	Lamprocystis purpurea DSM 4197 [ARBC]	25979	25903	-	Pro	GGG	[ENA]	○
>W131231776	AUIS01000012	Acidithiobacillia	Thermithiobacillus tepidarius DSM 3134 [AUIS]	1456	1380	-	Pro	GGG	[ENA]	○
>WENV180309663	OBJS01015696	[OBJS] beach sand metagenome; beach sand		168	244	+	Pro	GGG	[ENA]	◯
>WENV180353048	OBLQ010512455	[OBLQ] soil metagenome; soil		126	50	-	Pro	GGG	[ENA]	◯
>W141055234	AONC01000040	Gammaproteobacteria	Imhoffiella purpurea AK35 [AONC]	93997	93921	-	Pro	GGG	[ENA]	○
>WENV181171573	OEIV010271986	[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex		353	277	-	Pro	GGG	[ENA]	◯
>WENV181367857	OFQD01002202	[OFQD] freshwater metagenome; Freshwater Lake		1265	1189	-	Pro	GGG	[ENA]	◯
>WENV181406214	OGCG01000030	[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA		6593	6669	+	Pro	GGG	[ENA]	◯
>WENV181415172	OGCL01005178	[OGCL] hot springs metagenome; Hot spring water		5002	5075	+	Pro	GGG	[ENA]	◯
>W141262897	CCCS020000007	Acidithiobacillia	Acidithiobacillus ferrivorans [CCCS]	40547	40623	+	Pro	GGG	[ENA]	○
>C08000425	CP001132	Acidithiobacillia	Acidithiobacillus ferrooxidans ATCC 53993 [CP001132]	2209791	2209718	-	Pro	GGG	[Ensembl]	○
>WENV170008374	AOMP01001095	[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream		121	45	-	Pro	GGG	[ENA]	◯
>WENV170008403	AOMP01001698	[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream		960	884	-	Pro	GGG	[ENA]	◯
>WENV170008528	AOMQ01001723	[AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream		1370	1294	-	Pro	GGG	[ENA]	◯
>WENV170008659	AOMQ01015185	[AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream		78	2	-	Pro	GGG	[ENA]	◯
>WENV170701489	LKGT01009652	[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP		2251	2327	+	Pro	GGG	[ENA]	◯
>W141451664	JFBG01000058	Gammaproteobacteria	Thioalkalivibrio sp. HK1 [JFBG]	6633	6557	-	Pro	GGG	[ENA]	○
>C181044129	CP020370	Gammaproteobacteria	Candidatus Thiodictyon syntrophicum Cad16T [CP020370]	6128513	6128589	+	Pro	GGG	-	○
>C181130816	CP026328	Acidithiobacillia	Acidithiobacillus caldus MTH-04 [CP026328]	2427935	2428011	+	Pro	GGG	-	○
>C181158273	CP027663	Gammaproteobacteria	Acidiferrobacter sp. SPIII_3 [CP027663]	1928593	1928669	+	Pro	GGG	-	○
>C191005139	AP018795	Acidithiobacillia	Acidithiobacillus ferridurans JCM 18981 [AP018795]	559877	559801	-	Pro	GGG	-	○
>W09133833	ACQQ01000021	Gammaproteobacteria	Allochromatium vinosum DSM 180 [ACQQ]	53353	53429	+	Pro	GGG	[ENA]	○
>W09134899	ACVD01000052	Acidithiobacillia	Acidithiobacillus caldus ATCC 51756 [ACVD]	6761	6837	+	Pro	GGG	[ENA]	○
>W141695599	JMEB01000210	Acidithiobacillia	Acidithiobacillus thiooxidans [JMEB]	10453	10377	-	Pro	GGG	[ENA]	○
>W141822448	JQSG01000013	Gammaproteobacteria	Acidihalobacter prosperus [JQSG]	82218	82294	+	Pro	GGG	[ENA]	○
>W1910208735	FLUY01001748	Gammaproteobacteria	Candidatus Thiosymbion oneisti ectosymbiont of Laxus oneistus [FLUY]	5281	5357	+	Pro	GGG	[ENA]	○
>W1910208750	FLUZ01000531	Gammaproteobacteria	Candidatus Thiosymbion oneisti ectosymbiont of Laxus oneistus [FLUZ]	8142	8218	+	Pro	GGG	[ENA]	○
>W1910729492	MGYQ01000020	Gammaproteobacteria	Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_52_10 [MGYQ]	13019	12943	-	Pro	GGG	[ENA]	○
>W1910729606	MGYT01000147	Gammaproteobacteria	Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 [MGYT]	33762	33838	+	Pro	GGG	[ENA]	○
>W1910729752	MGYY01000032	Gammaproteobacteria	Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_52_10 [MGYY]	1975	1899	-	Pro	GGG	[ENA]	○
>W1910731086	MHDK01000061	Nitrospinota	Nitrospinae bacterium RIFCSPLOWO2_01_FULL_39_10 [MHDK]	3518	3442	-	Pro	GGG	[ENA]	○
>C09100378	CP001219	Acidithiobacillia	Acidithiobacillus ferrooxidans ATCC 23270 [CP001219]	2315090	2315014	-	Pro	GGG	[Ensembl]	○
>W1910831824	MXAV01000006	Acidithiobacillia	Acidithiobacillus marinus SH [MXAV]	34592	34668	+	Pro	GGG	[ENA]	○
>W1810236312	PPGH01000035	Gammaproteobacteria	Chromatium okenii LaCa [PPGH]	494906	494830	-	Pro	GGG	[ENA]	○
>W1810257119	PQJK01000002	Acidithiobacillia	Acidithiobacillus ferridurans IO-2C [PQJK]	234638	234714	+	Pro	GGG	[ENA]	○
>W1810282330	PSYR01000002	Gammaproteobacteria	Acidiferrobacter thiooxydans m-1 [PSYR]	731176	731252	+	Pro	GGG	[ENA]	○
>W1810679296	QKQP01000005	Acidithiobacillia	Acidithiobacillus ferrooxidans CCM 4253 [QKQP]	139263	139187	-	Pro	GGG	[ENA]	○
>W1810760167	QPJY01000002	Gammaproteobacteria	Thioalbus denitrificans DSM 26407 [QPJY]	54234	54310	+	Pro	GGG	[ENA]	○
>C151007956	CP005986	Acidithiobacillia	Acidithiobacillus caldus ATCC 51756 [CP005986]	2460610	2460686	+	Pro	GGG	[Ensembl]	○
>C151016253	CP007031	Gammaproteobacteria	Marichromatium purpuratum 984 [CP007031]	1209835	1209911	+	Pro	GGG	[Ensembl]	○
>W10127988	AEFB01000968	Acidithiobacillia	Acidithiobacillus sp. GGI-221 [AEFB]	1749	1673	-	Pro	GGG	[ENA]	○
>C10101199	CP001896	Gammaproteobacteria	Allochromatium vinosum DSM 180 [CP001896]	1142569	1142645	+	Pro	GGG	[Ensembl]	○
>C11100499	CP002573	Acidithiobacillia	Acidithiobacillus caldus SM-1 [CP002573]	2616998	2617074	+	Pro	GGG	[Ensembl]	○
>C11100742	CP002985	Acidithiobacillia	Acidithiobacillus ferrivorans SS3 [CP002985]	2518645	2518569	-	Pro	GGG	[Ensembl]	○
>W11135533	AEFB01000968	Acidithiobacillia	Acidithiobacillus sp. GGI-221 [AEFB]	1749	1673	-	Pro	GGG	[ENA]	○
>W1511510967	JXSN01000128	Gammaproteobacteria	Achromatium sp. WMS2 [JXSN]	292	368	+	Pro	GGG	[ENA]	○
>W11164278	AFJD01000008	Acidithiobacillia	Acidithiobacillus ferrivorans SS3 [AFJD]	85399	85475	+	Pro	GGG	[ENA]	○
>W11168549	AFOH01000122	Acidithiobacillia	Acidithiobacillus thiooxidans ATCC 19377 [AFOH]	49031	49107	+	Pro	GGG	[ENA]	○
>W11176070	AFWT01000024	Gammaproteobacteria	Thiorhodococcus drewsii AZ1 [AFWT]	74047	74123	+	Pro	GGG	[ENA]	○
>W11176090	AFWU01000001	Gammaproteobacteria	Marichromatium purpuratum 984 [AFWU]	273596	273672	+	Pro	GGG	[ENA]	○
>W11176170	AFWV01000011	Gammaproteobacteria	Thiocapsa marina 5811 [AFWV]	58591	58515	-	Pro	GGG	[ENA]	○
>W11178610	AGFC01000010	Gammaproteobacteria	Thiocystis violascens DSM 198 [AGFC]	39842	39766	-	Pro	GGG	[ENA]	○
>W11178672	AGFD01000034	Gammaproteobacteria	Thiorhodospira sibirica ATCC 700588 [AGFD]	13540	13616	+	Pro	GGG	[ENA]	○
>C121007020	CP003154	Gammaproteobacteria	Thiocystis violascens DSM 198 [CP003154]	1699760	1699684	-	Pro	GGG	[Ensembl]	○
>W1610085768	CVPF01000005	Gammaproteobacteria	Thiocapsa sp. KS1 [CVPF]	5090	5014	-	Pro	GGG	[ENA]	○
>W1610627906	LIEB01000024	Nitrospirota	Leptospirillum sp. YQP-1 [LIEB]	4955	4879	-	Pro	GGG	[ENA]	○
>W1610641848	LJBT01000093	Acidithiobacillia	Acidithiobacillus ferrooxidans [LJBT]	68070	68146	+	Pro	GGG	[ENA]	○
>W1610858989	LQRJ01000035	Acidithiobacillia	Acidithiobacillus ferrooxidans [LQRJ]	98088	98164	+	Pro	GGG	[ENA]	○
>W1610922915	LSYU01000110	Gammaproteobacteria	Marichromatium gracile [LSYU]	109722	109798	+	Pro	GGG	[ENA]	○
>W1610978268	LVXZ01000110	Acidithiobacillia	Acidithiobacillus ferrooxidans [LVXZ]	33625	33701	+	Pro	GGG	[ENA]	○
>W1611004664	LXQG01000054	Acidithiobacillia	Acidithiobacillus caldus [LXQG]	36433	36509	+	Pro	GGG	[ENA]	○
>W1611057360	MASQ01000076	Acidithiobacillia	Acidithiobacillus ferrivorans [MASQ]	35002	35078	+	Pro	GGG	[ENA]	○
>W1710090357	CVPF01000005	Gammaproteobacteria	Thiocapsa sp. KS1 [CVPF]	5090	5014	-	Pro	GGG	[ENA]	○
>W1710529481	FNNZ01000029	Gammaproteobacteria	Thiocapsa roseopersicina [FNNZ]	38450	38526	+	Pro	GGG	[ENA]	○
>W1710530609	FNOW01000037	Gammaproteobacteria	Allochromatium warmingii [FNOW]	1584	1508	-	Pro	GGG	[ENA]	○
>W1710743678	LGYM01000013	Acidithiobacillia	Acidithiobacillus thiooxidans [LGYM]	114677	114753	+	Pro	GGG	[ENA]	○
>W1710759033	LIEB01000024	Nitrospirota	Leptospirillum sp. YQP-1 [LIEB]	4955	4879	-	Pro	GGG	[ENA]	○
Identical group No.297560 (27 seq.)
>W1710799178	LJUK01000068	Acidithiobacillia	Acidithiobacillales bacterium SM23_46 [LJUK]	1736	1812	+	Pro	GGG	[ENA]	○
>W1710799755	LJVB01000046	Acidithiobacillia	Acidithiobacillales bacterium SM1_46 [LJVB]	7673	7749	+	Pro	GGG	[ENA]	○
>W1710893041	LNEJ01000016	Gammaproteobacteria	Gammaproteobacteria bacterium Ga0074134 [LNEJ]	23256	23180	-	Pro	GGG	[ENA]	○
>W1711403035	MFSQ01000064	Unclassified	Candidatus Muproteobacteria bacterium RBG_16_62_13 [MFSQ]	26378	26454	+	Pro	GGG	[ENA]	○
>W1711403061	MFSR01000009	Unclassified	Candidatus Muproteobacteria bacterium RBG_16_64_10 [MFSR]	3054	3130	+	Pro	GGG	[ENA]	○
>W1711403111	MFST01000054	Unclassified	Candidatus Muproteobacteria bacterium RBG_16_65_31 [MFST]	5354	5278	-	Pro	GGG	[ENA]	○
>W1711403136	MFSU01000060	Unclassified	Candidatus Muproteobacteria bacterium RBG_16_65_34 [MFSU]	14691	14615	-	Pro	GGG	[ENA]	○
>WENV180252341	OBEQ010441653	[OBEQ] groundwater metagenome; groundwater		207765	207841	+	Pro	GGG	[ENA]	◯
>WENV180269269	OBEQ012045380	[OBEQ] groundwater metagenome; groundwater		977	901	-	Pro	GGG	[ENA]	◯
>WENV180269274	OBEQ012045923	[OBEQ] groundwater metagenome; groundwater		918	842	-	Pro	GGG	[ENA]	◯
>WENV180308403	OBJR01001941	[OBJR] soil metagenome; soil		692	768	+	Pro	GGG	[ENA]	◯
>WENV180351829	OBLQ010111616	[OBLQ] soil metagenome; soil		124	48	-	Pro	GGG	[ENA]	◯
>WENV181288248	OFGY01033318	[OFGY] soil metagenome; Clay		358	434	+	Pro	GGG	[ENA]	◯
>WENV181298257	OFHL01064294	[OFHL] soil metagenome; Clay		178	102	-	Pro	GGG	[ENA]	◯
>WENV183672836	ORJL011214987	[ORJL] groundwater metagenome; groundwater		638	562	-	Pro	GGG	[ENA]	◯
>WENV183682885	ORMF010501019	[ORMF] groundwater metagenome; groundwater		392	468	+	Pro	GGG	[ENA]	◯
>WENV170711389	LNFM01005027	[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant		190	266	+	Pro	GGG	[ENA]	◯
>C181000811	AP014879	Gammaproteobacteria	Sulfuricaulis limicola HA5 [AP014879]	1501067	1500991	-	Pro	GGG	-	○
>C181000959	AP014936	Gammaproteobacteria	Sulfurifustis variabilis skN76 [AP014936]	1717429	1717505	+	Pro	GGG	-	○
>W1910714529	MFSW01000080	Unclassified	Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_01_60_12 [MFSW]	2518	2594	+	Pro	GGG	[ENA]	○
>W1910714564	MFSX01000151	Unclassified	Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_01_FULL_61_200 [MFSX]	1467	1543	+	Pro	GGG	[ENA]	○
>W1910714608	MFSZ01000113	Unclassified	Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_02_FULL_60_13 [MFSZ]	7284	7208	-	Pro	GGG	[ENA]	○
>W1910714640	MFTB01000017	Unclassified	Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_12_FULL_60_33 [MFTB]	5134	5210	+	Pro	GGG	[ENA]	○
>W1910714677	MFTC01000018	Unclassified	Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18 [MFTC]	3567	3643	+	Pro	GGG	[ENA]	○
>W1610663135	LJUK01000068	Acidithiobacillia	Acidithiobacillales bacterium SM23_46 [LJUK]	1736	1812	+	Pro	GGG	[ENA]	○
>W1610663712	LJVB01000046	Acidithiobacillia	Acidithiobacillales bacterium SM1_46 [LJVB]	7673	7749	+	Pro	GGG	[ENA]	○
>W1610753307	LNEJ01000016	Gammaproteobacteria	Gammaproteobacteria bacterium Ga0074134 [LNEJ]	23256	23180	-	Pro	GGG	[ENA]	○
Identical group No.415657 (2 seq.)
>W1710799201	LJUK01000214	Acidithiobacillia	Acidithiobacillales bacterium SM23_46 [LJUK]	1869	1945	+	Pro	GGG	[ENA]	○
>W1610663158	LJUK01000214	Acidithiobacillia	Acidithiobacillales bacterium SM23_46 [LJUK]	1869	1945	+	Pro	GGG	[ENA]	○