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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Deinococcus-Thermus
Anticodon = CCA
HIT:
2 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.526319 (2 seq.)
>PL171000823
CP010825
Deinococcus-Thermus
Thermus aquaticus Y51MC23 plasmid:pTA69
57523
57448
-
Trp
CCA
[ENA]
¡û
>W08011606
ABVK01000023
Deinococcota
Thermus aquaticus Y51MC23 [ABVK]
1316
1244
-
Trp
CCA
[ENA]
¡û
Identical group No.526320 (2 seq.)
>PL171000824
CP010825
Deinococcus-Thermus
Thermus aquaticus Y51MC23 plasmid:pTA69
52749
52674
-
Trp
CCA
[ENA]
¡û
>W08011603
ABVK01000015
Deinococcota
Thermus aquaticus Y51MC23 [ABVK]
52481
52409
-
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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