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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Fusobacteria
HIT:
7 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.12082 (1 seq.)
>PL171000443
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
712480
712387
-
SeC(p)
TCA
[ENA]
¡û
Identical group No.152473 (1 seq.)
>PL171000444
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
271956
271870
-
Leu
GAG
[ENA]
¡û
Identical group No.179211 (1 seq.)
>PL171000445
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
271862
271777
-
Leu
GAG
[ENA]
¡û
Identical group No.446400 (1 seq.)
>PL171000442
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
883367
883291
-
Arg
CCT
[ENA]
¡û
Identical group No.647584 (1 seq.)
>PL171000415
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
99588
99663
+
Thr
GGT
[ENA]
¡û
Identical group No.647585 (1 seq.)
>PL171000440
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
919596
919521
-
Ala
GGC
[ENA]
¡û
Identical group No.775809 (3 seq.)
>PL171000423
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
245846
245920
+
Glu
TTC
[ENA]
¡û
>PL171000436
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
919940
919866
-
Glu
TTC
[ENA]
¡û
>PL171000438
CP002282
Fusobacteria
Ilyobacter polytropus DSM 2926 plasmid:pILYOP01
919777
919703
-
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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