tRNA genes clustered and arranged according to each identical group

Hydrogenophilia

Anticodon = CCA

HIT: 4 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.456012 (78 seq.)
>W1711135977	LUZR01000029	Betaproteobacteria	Burkholderiales bacterium Beta_02 [LUZR]	13360	13285	-	Trp	CCA	[ENA]	○
>W1711387287	MEGM01000164	Betaproteobacteria	Rubrivivax sp. SCN 70-15 [MEGM]	162	237	+	Trp	CCA	[ENA]	○
>W1711387448	MEGQ01000063	Betaproteobacteria	Thiomonas sp. SCN 64-16 [MEGQ]	12680	12605	-	Trp	CCA	[ENA]	○
>W1711583876	MNXU01000011	Betaproteobacteria	Betaproteobacteria bacterium CG2_30_68_42 [MNXU]	15696	15621	-	Trp	CCA	[ENA]	○
>W1711744367	MUHU01000036	Betaproteobacteria	Derxia lacustris [MUHU]	103543	103468	-	Trp	CCA	[ENA]	○
>W1711793359	MWLO01000124	Betaproteobacteria	Ideonella sp. A 288 A 288 [MWLO]	16732	16657	-	Trp	CCA	[ENA]	○
>C171049729	CP016448	Betaproteobacteria	Methyloversatilis sp. RAC08 [CP016448]	2523433	2523508	+	Trp	CCA	-	○
>C171103258	CP020046	Betaproteobacteria	Thiomonas intermedia ATCC 15466 [CP020046]	1659640	1659565	-	Trp	CCA	-	○
>W131163049	AQZM01000002	Betaproteobacteria	Methyloversatilis universalis EHg5 [AQZM]	618477	618552	+	Trp	CCA	[ENA]	○
>W131166932	ARCV01000006	Betaproteobacteria	Methyloversatilis thermotolerans NVD [ARCV]	44593	44668	+	Trp	CCA	[ENA]	○
>W131170313	ARFL01000001	Betaproteobacteria	Methyloversatilis discipulorum RZ94 [ARFL]	15601	15526	-	Trp	CCA	[ENA]	○
>W131178080	ARLH01000047	Betaproteobacteria	Caldimonas manganoxidans ATCC BAA-369 [ARLH]	16985	16910	-	Trp	CCA	[ENA]	○
>W131186089	ARVV01000001	Betaproteobacteria	Methyloversatilis discipulorum RZ18-153 [ARVV]	714359	714434	+	Trp	CCA	[ENA]	○
>W131186650	ARWH01000001	Betaproteobacteria	Methyloversatilis universalis Fam500 [ARWH]	3950330	3950405	+	Trp	CCA	[ENA]	○
>W131225553	AUDR01000005	Hydrogenophilia	Tepidiphilus margaritifer DSM 15129 [AUDR]	796	871	+	Trp	CCA	[ENA]	○
>C001307	AM406670	Betaproteobacteria	Azoarcus olearius BH72 [AM406670]	3759359	3759284	-	Trp	CCA	[Ensembl]	○
>C001347	CR555306	Betaproteobacteria	Aromatoleum aromaticum EbN1 [CR555306]	2244297	2244372	+	Trp	CCA	[Ensembl]	○
>WENV180114122	OAPR01168749	[OAPR] marine metagenome; seawater		117	42	-	Trp	CCA	[ENA]	◯
>WENV180209548	OBAL01003941	[OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER		642	717	+	Trp	CCA	[ENA]	◯
>WENV180357277	OBNN01000461	[OBNN] marine metagenome; Coastal water		2065	2140	+	Trp	CCA	[ENA]	◯
>WENV180360517	OBNU01000509	[OBNU] marine metagenome; ENVO:00000021 'freshwater lake		1732	1657	-	Trp	CCA	[ENA]	◯
>WENV180369604	OBOG01188274	[OBOG] marine metagenome; seawater		323	248	-	Trp	CCA	[ENA]	◯
>WENV180393666	OBPR01000571	[OBPR] marine metagenome; ENVO:00002042		359	284	-	Trp	CCA	[ENA]	◯
>WENV181144480	OEHO01024707	[OEHO] metagenome; unknown		228	303	+	Trp	CCA	[ENA]	◯
>WENV181189715	OEOF01169495	[OEOF] activated sludge metagenome; Activated Sludge		81	156	+	Trp	CCA	[ENA]	◯
>WENV181223615	OFDC01048908	[OFDC] hot springs metagenome; Water		141	216	+	Trp	CCA	[ENA]	◯
>WENV181230993	OFEK01006813	[OFEK] activated sludge metagenome; Anaerobic digester		4008	3933	-	Trp	CCA	[ENA]	◯
>WENV181412290	OGCI01114482	[OGCI] hot springs metagenome; Hot spring water		410	485	+	Trp	CCA	[ENA]	◯
>W141169898	AXWS01000019	Betaproteobacteria	Derxia gummosa DSM 723 [AXWS]	168	243	+	Trp	CCA	[ENA]	○
>W141216098	AZUP01000001	Betaproteobacteria	Methyloversatilis discipulorum FAM1 [AZUP]	2348914	2348839	-	Trp	CCA	[ENA]	○
>WENV183681225	ORMF010276792	[ORMF] groundwater metagenome; groundwater		35586	35511	-	Trp	CCA	[ENA]	◯
>WENV183703459	PDVJ01015640	[PDVJ] alkali sediment metagenome; glacial lake sediment		1304	1379	+	Trp	CCA	[ENA]	◯
>WENV170010078	APMI01007911	[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater		13295	13370	+	Trp	CCA	[ENA]	◯
>WENV170010387	APMI01015442	[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater		20893	20818	-	Trp	CCA	[ENA]	◯
>WENV170651154	JRYF01001325	[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated		4369	4294	-	Trp	CCA	[ENA]	◯
>WENV170654818	JRYL01027229	[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different		115	40	-	Trp	CCA	[ENA]	◯
>WENV170713910	LNFM01046409	[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant		1082	1157	+	Trp	CCA	[ENA]	◯
>WENV170713978	LNFM01049190	[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant		113	188	+	Trp	CCA	[ENA]	◯
>WENV170714158	LNFM01057988	[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant		111	186	+	Trp	CCA	[ENA]	◯
>WENV170961724	MLJW01000680	[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for		11478	11403	-	Trp	CCA	[ENA]	◯
>WENV170961926	MLJW01007386	[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for		170	245	+	Trp	CCA	[ENA]	◯
>WENV170994745	MWWE01042313	[MWWE] soil metagenome; MS1-1 sample; Antarctic (ecotone) soil		531	456	-	Trp	CCA	[ENA]	◯
>C181081472	CP023439	Betaproteobacteria	Thauera sp. K11 [CP023439]	3329082	3329007	-	Trp	CCA	-	○
>C191004328	AP018721	Betaproteobacteria	Sulfuritortus calidifontis J1A [AP018721]	405373	405448	+	Trp	CCA	-	○
>C191022904	CP022958	Betaproteobacteria	Azoarcus sp. DD4 [CP022958]	4520181	4520106	-	Trp	CCA	-	○
>W141807119	JPOE01000002	Betaproteobacteria	Thiomonas sp. FB-Cd [JPOE]	2574354	2574429	+	Trp	CCA	[ENA]	○
>W1910207455	FLMQ01000055	Betaproteobacteria	Thiomonas delicata DSM 16361 [FLMQ]	41208	41133	-	Trp	CCA	[ENA]	○
>W1910211109	FMBP01000011	Betaproteobacteria	Thiomonas sp. X19 [FMBP]	562747	562672	-	Trp	CCA	[ENA]	○
>W1810273287	PSNX01000015	Betaproteobacteria	Caldimonas caldifontis BCRC 80649 [PSNX]	236339	236264	-	Trp	CCA	[ENA]	○
>W1810659016	QJJS01000019	Betaproteobacteria	Sphaerotilus hippei DSM 566 [QJJS]	92154	92079	-	Trp	CCA	[ENA]	○
>W10105788	ACXV01000009	Betaproteobacteria	Thiomonas intermedia K12 [ACXV]	229	304	+	Trp	CCA	[ENA]	○
>C10113344	CP002021	Betaproteobacteria	Thiomonas intermedia [CP002021]	3301037	3300962	-	Trp	CCA	[Ensembl]	○
>W11108108	ACXV01000009	Betaproteobacteria	Thiomonas intermedia K12 [ACXV]	229	304	+	Trp	CCA	[ENA]	○
>W1510741289	CYHF01000009	Betaproteobacteria	Thiomonas bhubaneswarensis DSM 18181 [CYHF]	164308	164233	-	Trp	CCA	[ENA]	○
>W1510741402	CYHH01000024	Hydrogenophilia	Tepidiphilus thermophilus JCM 19170 [CYHH]	15981	15906	-	Trp	CCA	[ENA]	○
>W1511580987	LARU01000002	Betaproteobacteria	Azoarcus sp. PA01 [LARU]	2002529	2002604	+	Trp	CCA	[ENA]	○
>WENV046617	AACY022612192	Marine microbial communities from Global Ocean Sampling (GOS)		664	587	-	Trp	CCA	[ENA]
>W11162828	AFHG01000051	Betaproteobacteria	Methyloversatilis universalis FAM5 [AFHG]	510	585	+	Trp	CCA	[ENA]	○
>C121016360	FP475956	Betaproteobacteria	Thiomonas arsenitoxydans 3As [FP475956]	3628312	3628237	-	Trp	CCA	[Ensembl]	○
>C161095095	CP016210	Betaproteobacteria	Azoarcus olearius DQS-4 [CP016210]	3846035	3845960	-	Trp	CCA	-	○
>W121077785	AKCV01000007	Betaproteobacteria	Burkholderiaceae bacterium PBA PBA [AKCV]	18064	17989	-	Trp	CCA	[ENA]	○
>W1610074144	BCWK01000028	Betaproteobacteria	Caldimonas taiwanensis NBRC 104434 [BCWK]	16891	16816	-	Trp	CCA	[ENA]	○
>W1610085385	CTRI01000003	Betaproteobacteria	Thiomonas arsenitoxydans B1 [CTRI]	570463	570538	+	Trp	CCA	[ENA]	○
>W1610085428	CTRJ01000007	Betaproteobacteria	Thiomonas arsenitoxydans CB6 [CTRJ]	634108	634183	+	Trp	CCA	[ENA]	○
>W1610085494	CTRK01000062	Betaproteobacteria	Thiomonas arsenitoxydans ACO3 [CTRK]	42529	42454	-	Trp	CCA	[ENA]	○
>W1610085535	CTRL01000065	Betaproteobacteria	Thiomonas arsenitoxydans ACO7 [CTRL]	42529	42454	-	Trp	CCA	[ENA]	○
>W1610085554	CTRM01000025	Betaproteobacteria	Thiomonas sp. CB3 [CTRM]	62786	62861	+	Trp	CCA	[ENA]	○
>W1610632403	LIPU01000024	Hydrogenophilia	Tepidiphilus thermophilus [LIPU]	15981	15906	-	Trp	CCA	[ENA]	○
>W1610632430	LIPV01000009	Betaproteobacteria	Thiomonas bhubaneswarensis [LIPV]	164308	164233	-	Trp	CCA	[ENA]	○
>W1610947097	LUZR01000029	Betaproteobacteria	Burkholderiales bacterium Beta_02 [LUZR]	13360	13285	-	Trp	CCA	[ENA]	○
>W1710071262	BCWK01000028	Betaproteobacteria	Caldimonas taiwanensis NBRC 104434 [BCWK]	16891	16816	-	Trp	CCA	[ENA]	○
>W1710089974	CTRI01000003	Betaproteobacteria	Thiomonas arsenitoxydans B1 [CTRI]	570463	570538	+	Trp	CCA	[ENA]	○
>W1710090017	CTRJ01000007	Betaproteobacteria	Thiomonas arsenitoxydans CB6 [CTRJ]	634108	634183	+	Trp	CCA	[ENA]	○
>W1710090083	CTRK01000062	Betaproteobacteria	Thiomonas arsenitoxydans ACO3 [CTRK]	42529	42454	-	Trp	CCA	[ENA]	○
>W1710090124	CTRL01000065	Betaproteobacteria	Thiomonas arsenitoxydans ACO7 [CTRL]	42529	42454	-	Trp	CCA	[ENA]	○
>W1710090143	CTRM01000025	Betaproteobacteria	Thiomonas sp. CB3 [CTRM]	62786	62861	+	Trp	CCA	[ENA]	○
>W1710766789	LIPU01000024	Hydrogenophilia	Tepidiphilus thermophilus [LIPU]	15981	15906	-	Trp	CCA	[ENA]	○
>W1710766816	LIPV01000009	Betaproteobacteria	Thiomonas bhubaneswarensis [LIPV]	164308	164233	-	Trp	CCA	[ENA]	○
Identical group No.465087 (41 seq.)
>W1711024805	LRBG01000020	Betaproteobacteria	Paraburkholderia monticola [LRBG]	287	362	+	Trp	CCA	[ENA]	○
>W1712081855	NHOM01000030	Betaproteobacteria	Burkholderia sp. Bk [NHOM]	213	288	+	Trp	CCA	[ENA]	○
>WENV180041540	LLBZ010176443	[LLBZ] soil metagenome; soil from tomato rhizosphere		212	137	-	Trp	CCA	[ENA]	◯
>WENV180103181	OAPA01005290	[OAPA] marine metagenome; ENVO:00002010		377	452	+	Trp	CCA	[ENA]	◯
>WENV180111021	OAPN01022534	[OAPN] marine metagenome; 2011		460	385	-	Trp	CCA	[ENA]	◯
>WENV180114554	OAPS01018658	[OAPS] marine metagenome; sea water		528	453	-	Trp	CCA	[ENA]	◯
>WENV180292166	OBIV01333501	[OBIV] soil metagenome; Clay		237	312	+	Trp	CCA	[ENA]	◯
>WENV180351671	OBLQ010085088	[OBLQ] soil metagenome; soil		970	895	-	Trp	CCA	[ENA]	◯
>WENV180591567	OCOV01048045	[OCOV] marine metagenome; ENVO:01000301		197	272	+	Trp	CCA	[ENA]	◯
>WENV181293700	OFHG01016874	[OFHG] soil metagenome; Clay		654	579	-	Trp	CCA	[ENA]	◯
>WENV181367680	OFQC01001113	[OFQC] freshwater metagenome; Freshwater Lake		172	97	-	Trp	CCA	[ENA]	◯
>WENV181368796	OFQN01000663	[OFQN] freshwater metagenome; Freshwater Lake		4502	4427	-	Trp	CCA	[ENA]	◯
>WENV181369299	OFQP01000158	[OFQP] freshwater metagenome; Freshwater Lake		8639	8564	-	Trp	CCA	[ENA]	◯
>WENV181370586	OFQT01000498	[OFQT] freshwater metagenome; Freshwater Lake		2191	2266	+	Trp	CCA	[ENA]	◯
>WENV181848562	OGVZ01011649	[OGVZ] freshwater metagenome; freshwater		1204	1279	+	Trp	CCA	[ENA]	◯
>W141237366	BBJF01000033	Betaproteobacteria	Paraburkholderia ginsengisoli NBRC 100965 [BBJF]	17927	17852	-	Trp	CCA	[ENA]	○
>WENV183685483	ORMF010855836	[ORMF] groundwater metagenome; groundwater		148	223	+	Trp	CCA	[ENA]	◯
>WENV183685540	ORMF010862559	[ORMF] groundwater metagenome; groundwater		74	149	+	Trp	CCA	[ENA]	◯
>WENV183750350	PPFU01291125	[PPFU] hypolithon metagenome; Antarctic Hypolithon		342	267	-	Trp	CCA	[ENA]	◯
>WENV170009854	APMI01003953	[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater		79	154	+	Trp	CCA	[ENA]	◯
>W141401161	JDSS02000018	Betaproteobacteria	Candidatus Accumulibacter vicinus sp. SK-01 [JDSS]	308401	308326	-	Trp	CCA	[ENA]	○
>W141401215	JDST02000089	Betaproteobacteria	Candidatus Accumulibacter cognatus sp. SK-02 [JDST]	80	155	+	Trp	CCA	[ENA]	○
>W141402447	JDVG02000462	Betaproteobacteria	Candidatus Accumulibacter phosphatis sp. BA-91 [JDVG]	307	382	+	Trp	CCA	[ENA]	○
>WENV170556461	CXWL01009056	[CXWL] groundwater metagenome; biofilm material		1140	1215	+	Trp	CCA	[ENA]	◯
>WENV170566191	FKKE01008946	[FKKE] freshwater metagenome; freshwater		126	51	-	Trp	CCA	[ENA]	◯
>WENV170652469	JRYH01003790	[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and		39	114	+	Trp	CCA	[ENA]	◯
>C191003413	AP018558	Hydrogenophilia	Hydrogenophilus thermoluteolus TH-1 [AP018558]	413723	413798	+	Trp	CCA	-	○
>W1910699226	MERB01000051	Betaproteobacteria	Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 [MERB]	74520	74445	-	Trp	CCA	[ENA]	○
>W1810047293	OMSW01000308	Betaproteobacteria	Burkholderiales bacterium Peat soil MAG SbB2 [OMSW]	1356	1431	+	Trp	CCA	[ENA]	○
>W1810351299	PVEN01000017	Betaproteobacteria	Paraburkholderia sp. BL21I4N1 [PVEN]	1893	1968	+	Trp	CCA	[ENA]	○
>W1810682297	QKTZ01000017	Betaproteobacteria	Paraburkholderia sp. PDC91 [QKTZ]	2087	2162	+	Trp	CCA	[ENA]	○
>C10101130	CP001715	Betaproteobacteria	Candidatus Accumulibacter regalis [CP001715]	4020476	4020401	-	Trp	CCA	[Ensembl]	○
>W1511592937	LBIU01000069	Betaproteobacteria	Candidatus Accumulibacter adiacens phosphatis [LBIU]	117	192	+	Trp	CCA	[ENA]	○
>W1511592994	LBIV01000305	Betaproteobacteria	Candidatus Accumulibacter phosphatis [LBIV]	121	196	+	Trp	CCA	[ENA]	○
>W1610506474	FLQY01000195	Betaproteobacteria	Candidatus Propionivibrio aalborgensis S1 [FLQY]	118	193	+	Trp	CCA	[ENA]	○
>W1610872917	LRBG01000020	Betaproteobacteria	Paraburkholderia monticola [LRBG]	287	362	+	Trp	CCA	[ENA]	○
>WENV079759	AATN01000298	Wastewater EBPR microbial communities from Bioreactor (Australian sludge)		2164	2241	+	Trp	CCA	[ENA]
>WENV079940	AATN01010758	Wastewater EBPR microbial communities from Bioreactor (Australian sludge)		582	659	+	Trp	CCA	[ENA]
>WENV079984	AATO01000127	Wastewater EBPR microbial communities from Bioreactor (USA sludge)		12094	12017	-	Trp	CCA	[ENA]
>W1710498977	FLQY01000195	Betaproteobacteria	Candidatus Propionivibrio aalborgensis S1 [FLQY]	118	193	+	Trp	CCA	[ENA]	○
>W1710526865	FNKP01000001	Betaproteobacteria	Paraburkholderia fungorum [FNKP]	13047	12972	-	Trp	CCA	[ENA]	○
Identical group No.490893 (5 seq.)
>W1711583432	MNXE01000051	Hydrogenophilia	Hydrogenophilaceae bacterium CG1_02_62_390 [MNXE]	15242	15167	-	Trp	CCA	[ENA]	○
>W131233969	AUKK01000088	Betaproteobacteria	Glomeribacter sp. 1016415 [AUKK]	13106	13031	-	Trp	CCA	[ENA]	○
>WENV180253901	OBEQ010584359	[OBEQ] groundwater metagenome; groundwater		2731	2656	-	Trp	CCA	[ENA]	◯
>C191001047	AP018150	Betaproteobacteria	Mycoavidus cysteinexigens B1-EB [AP018150]	269506	269581	+	Trp	CCA	-	○
>W1510013092	BBOF01000052	Betaproteobacteria	bacterium endosymbiont of Mortierella elongata FMR23-6 [BBOF]	98123	98048	-	Trp	CCA	[ENA]	○
Identical group No.493357 (16 seq.)
>W1711387347	MEGN01000018	Betaproteobacteria	Thiobacillus sp. SCN 65-179 [MEGN]	138	213	+	Trp	CCA	[ENA]	○
>W1711387368	MEGO01000037	Betaproteobacteria	Thiobacillus sp. SCN 64-317 [MEGO]	33385	33310	-	Trp	CCA	[ENA]	○
>W1711414486	MGZN01000486	Hydrogenophilia	Hydrogenophilales bacterium RIFOXYA1_FULL_63_33 [MGZN]	3737	3662	-	Trp	CCA	[ENA]	○
>W1711504036	MKUE01000064	Betaproteobacteria	Thiobacillus sp. 65-1059 [MKUE]	9016	8941	-	Trp	CCA	[ENA]	○
>W1711504102	MKUF01000017	Betaproteobacteria	Thiobacillus sp. 65-69 [MKUF]	16345	16270	-	Trp	CCA	[ENA]	○
>W1711504128	MKUG01000121	Betaproteobacteria	Thiobacillus sp. 65-1402 [MKUG]	7319	7244	-	Trp	CCA	[ENA]	○
>W1711506494	MKWL01000013	Betaproteobacteria	Thiobacillus sp. 0-1251 [MKWL]	15396	15321	-	Trp	CCA	[ENA]	○
>W1711506551	MKWM01000072	Betaproteobacteria	Thiobacillus sp. 63-78 [MKWM]	216	291	+	Trp	CCA	[ENA]	○
>W131160311	AQWL01000024	Betaproteobacteria	Thiobacillus denitrificans DSM 12475 [AQWL]	15379	15304	-	Trp	CCA	[ENA]	○
>W131168100	ARDU01000014	Betaproteobacteria	Thiobacillus thioparus DSM 505 [ARDU]	1046	1121	+	Trp	CCA	[ENA]	○
>C025385	CP000116	Betaproteobacteria	Thiobacillus denitrificans ATCC 25259 [CP000116]	420743	420818	+	Trp	CCA	[Ensembl]	○
>WENV180291977	OBIV01251544	[OBIV] soil metagenome; Clay		408	333	-	Trp	CCA	[ENA]	◯
>WENV181190699	OEPS010001255	[OEPS] soil metagenome; soil		8113	8038	-	Trp	CCA	[ENA]	◯
>WENV181231752	OFEK01059678	[OFEK] activated sludge metagenome; Anaerobic digester		639	714	+	Trp	CCA	[ENA]	◯
>WENV170668245	LADL02002111	[LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole		5787	5712	-	Trp	CCA	[ENA]	◯
>W09101598	AAFH01000008	Betaproteobacteria	Thiobacillus denitrificans ATCC 25259 [AAFH]	17024	16949	-	Trp	CCA	[ENA]	○