tRNA genes clustered and arranged according to each identical group

Line Islands Corals, microbial fraction from water of Palmyra (SRP000140)

Anticodon = TTG

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.657325 (90 seq.)
>W1710852945 LLWE01000024 Alphaproteobacteria Pseudovibrio stylochi [LLWE] 465843 465917 + Gln TTG [ENA] ¡û
>W1710859348 LMCB01000122 Alphaproteobacteria Pseudovibrio axinellae [LMCB] 44812 44738 - Gln TTG [ENA] ¡û
>W1710859364 LMCC01000004 Alphaproteobacteria Pseudovibrio sp. Ad13 [LMCC] 372394 372468 + Gln TTG [ENA] ¡û
>W1710859426 LMCD01000005 Alphaproteobacteria Pseudovibrio sp. Ad14 [LMCD] 82671 82745 + Gln TTG [ENA] ¡û
>W1710859485 LMCE01000043 Alphaproteobacteria Pseudovibrio sp. Ad26 [LMCE] 82708 82782 + Gln TTG [ENA] ¡û
>W1710859544 LMCF01000021 Alphaproteobacteria Pseudovibrio sp. Ad37 [LMCF] 33853 33927 + Gln TTG [ENA] ¡û
>W1710859608 LMCG01000027 Alphaproteobacteria Pseudovibrio sp. Ad46 [LMCG] 249863 249937 + Gln TTG [ENA] ¡û
>W1710859656 LMCH01000002 Alphaproteobacteria Pseudovibrio sp. Ad5 [LMCH] 88897 88823 - Gln TTG [ENA] ¡û
>W1710859744 LMCI01000035 Alphaproteobacteria Pseudovibrio sp. W64 [LMCI] 111699 111773 + Gln TTG [ENA] ¡û
>W1710859827 LMCJ01000064 Alphaproteobacteria Pseudovibrio sp. W74 [LMCJ] 116786 116712 - Gln TTG [ENA] ¡û
>W1710859871 LMCK01000110 Alphaproteobacteria Pseudovibrio sp. WM33 [LMCK] 69062 68988 - Gln TTG [ENA] ¡û
>W1711127321 LUQC01000031 Alphaproteobacteria Rhodobacteraceae bacterium REDSEA-S34_B6 [LUQC] 4852 4778 - Gln TTG [ENA] ¡û
>WENV180107638 OAPH01001007 [OAPH] marine metagenome; seawater 1731 1657 - Gln TTG [ENA] ¢þ
>WENV180273699 OBEV01001672 [OBEV] marine metagenome; marine 1024 950 - Gln TTG [ENA] ¢þ
>WENV180637326 OCRG01009486 [OCRG] marine metagenome; seawater 403 477 + Gln TTG [ENA] ¢þ
>WENV018422 AACY020508713 Marine microbial communities from Global Ocean Sampling (GOS) 1790 1866 + Gln TTG [ENA]
>WENV183698455 OZSS01001147 [OZSS] metagenome; Seawater sample 6811 6885 + Gln TTG [ENA] ¢þ
>ENV08000857 ABMK01013759 marine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 40 114 + Gln TTG [ENA] ¡û
>WENV170014532 AYRH01001199 [AYRH] bioreactor metagenome; day 46 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment 352 426 + Gln TTG [ENA] ¢þ
>WENV170116643 CENG01190804 [CENG] marine metagenome genome assembly TARA_007_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 267 341 + Gln TTG [ENA] ¢þ
>WENV170120368 CENJ01294405 [CENJ] marine metagenome genome assembly TARA_009_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 702 628 - Gln TTG [ENA] ¢þ
>WENV170132804 CENT01129268 [CENT] marine metagenome genome assembly TARA_007_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 480 406 - Gln TTG [ENA] ¢þ
>WENV170134581 CENU01122368 [CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 435 509 + Gln TTG [ENA] ¢þ
>WENV170139108 CENW01257016 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 75 + Gln TTG [ENA] ¢þ
>WENV170149398 CEOC01025744 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8539 8465 - Gln TTG [ENA] ¢þ
>WENV170159565 CEOK01074269 [CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 129 203 + Gln TTG [ENA] ¢þ
>WENV170166176 CEOO01040393 [CEOO] marine metagenome genome assembly TARA_036_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5 79 + Gln TTG [ENA] ¢þ
>WENV170211109 CEPW01040244 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4748 4822 + Gln TTG [ENA] ¢þ
>WENV170286693 CERW01130349 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 830 904 + Gln TTG [ENA] ¢þ
>WENV170302854 CESH01214611 [CESH] marine metagenome genome assembly TARA_094_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1689 1763 + Gln TTG [ENA] ¢þ
>WENV170311064 CESM01101085 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 659 733 + Gln TTG [ENA] ¢þ
>WENV170367127 CETP01004561 [CETP] marine metagenome genome assembly TARA_122_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 95 169 + Gln TTG [ENA] ¢þ
>WENV170406275 CEUH01014081 [CEUH] marine metagenome genome assembly TARA_137_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 102 176 + Gln TTG [ENA] ¢þ
>WENV170413672 CEUK01132566 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 498 572 + Gln TTG [ENA] ¢þ
>WENV170470778 CEVG01010341 [CEVG] marine metagenome genome assembly TARA_140_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1181 1255 + Gln TTG [ENA] ¢þ
>WENV170509314 CEVY01019264 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1132 1206 + Gln TTG [ENA] ¢þ
>WENV170513721 CEWA01025652 [CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 458 384 - Gln TTG [ENA] ¢þ
>WENV170534443 CEWO01254789 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 112 38 - Gln TTG [ENA] ¢þ
>WENV170578785 FUFK010036552 [FUFK] metagenome; unknown 9699 9773 + Gln TTG [ENA] ¢þ
>WENV170581835 FUFK010068464 [FUFK] metagenome; unknown 5361 5287 - Gln TTG [ENA] ¢þ
>WENV170584640 FUFK010227634 [FUFK] metagenome; unknown 4451 4525 + Gln TTG [ENA] ¢þ
>WENV170587338 FUFK010484116 [FUFK] metagenome; unknown 3284 3358 + Gln TTG [ENA] ¢þ
>WENV170591979 FUFK010794675 [FUFK] metagenome; unknown 1734 1808 + Gln TTG [ENA] ¢þ
>WENV170728362 LULE01023280 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 2 76 + Gln TTG [ENA] ¢þ
>WENV170731789 LULI01004039 [LULI] marine metagenome; Red Sea water column Station 169 - depth 50m 1545 1619 + Gln TTG [ENA] ¢þ
>WENV170733015 LULJ01003400 [LULJ] marine metagenome; Red Sea water column Station 169 - depth 25m 2470 2396 - Gln TTG [ENA] ¢þ
>WENV170733827 LULK01000161 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 4852 4778 - Gln TTG [ENA] ¢þ
>WENV170738227 LULO01030476 [LULO] marine metagenome; Red Sea water column Station 149 - depth 50m 167 241 + Gln TTG [ENA] ¢þ
>WENV170738900 LULP01006831 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 1024 950 - Gln TTG [ENA] ¢þ
>WENV170743358 LULV01036774 [LULV] marine metagenome; Red Sea water column Station 108 - depth 25m 146 220 + Gln TTG [ENA] ¢þ
>WENV170750991 LUMH01009472 [LUMH] marine metagenome; Red Sea water column Station 34 - depth 25m 894 968 + Gln TTG [ENA] ¢þ
>WENV170751966 LUMI01019863 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 34 108 + Gln TTG [ENA] ¢þ
>WENV170755425 LUMN01001863 [LUMN] marine metagenome; Red Sea water column Station 22 - depth 25m 1746 1820 + Gln TTG [ENA] ¢þ
>WENV170756091 LUMO01004812 [LUMO] marine metagenome; Red Sea water column Station 22 - depth 10m 212 286 + Gln TTG [ENA] ¢þ
>WENV170757498 LUMQ01002450 [LUMQ] marine metagenome; Red Sea water column Station 12 - depth 25m 8370 8444 + Gln TTG [ENA] ¢þ
>WENV170758389 LUMR01001611 [LUMR] marine metagenome; Red Sea water column Station 12 - depth 10m 509 435 - Gln TTG [ENA] ¢þ
>WENV170852074 MDTA01143114 [MDTA] marine metagenome; seawater 3395 3321 - Gln TTG [ENA] ¢þ
>WENV170891251 MDTD01021309 [MDTD] marine metagenome; seawater 23 97 + Gln TTG [ENA] ¢þ
>WENV170895759 MDTD01084712 [MDTD] marine metagenome; seawater 73 -1 - Gln TTG [ENA] ¢þ
>WENV170915811 MDTE01169246 [MDTE] marine metagenome; seawater 76 2 - Gln TTG [ENA] ¢þ
>WENV025067 AACY020858588 Marine microbial communities from Global Ocean Sampling (GOS) 233 157 - Gln TTG [ENA]
>W1910285222 FREX01000011 Alphaproteobacteria Pseudovibrio sp. Alg231-02 [FREX] 94387 94461 + Gln TTG [ENA] ¡û
>WENV002612 AACY020072555 Marine microbial communities from Global Ocean Sampling (GOS) 738 814 + Gln TTG [ENA]
>W1911538947 OMPG01000002 Alphaproteobacteria Pseudovibrio ascidiaceicola AU243 [OMPG] 86069 86143 + Gln TTG [ENA] ¡û
>SRA1000882 SRR001048.257805 Line Islands Corals, microbial fraction from water of Palmyra (SRP000140) 40 114 + Gln TTG [SRA]
>WENV002698 AACY020074595 Marine microbial communities from Global Ocean Sampling (GOS) 1141 1065 - Gln TTG [ENA]
>W1810725556 QODK01000003 Alphaproteobacteria Cohaesibacter intestini YE-B6 [QODK] 544866 544792 - Gln TTG [ENA] ¡û
>WENV002917 AACY020079760 Marine microbial communities from Global Ocean Sampling (GOS) 237 163 - Gln TTG [ENA]
>WENV030721 AACY021304864 Marine microbial communities from Global Ocean Sampling (GOS) 444 518 + Gln TTG [ENA]
>WENV033398 AACY021526079 Marine microbial communities from Global Ocean Sampling (GOS) 442 518 + Gln TTG [ENA]
>WENV037822 AACY021884721 Marine microbial communities from Global Ocean Sampling (GOS) 369 445 + Gln TTG [ENA]
>WENV040311 AACY022075590 Marine microbial communities from Global Ocean Sampling (GOS) 204 278 + Gln TTG [ENA]
>WENV005436 AACY020151326 Marine microbial communities from Global Ocean Sampling (GOS) 1088 1012 - Gln TTG [ENA]
>WENV005788 AACY020162399 Marine microbial communities from Global Ocean Sampling (GOS) 169 243 + Gln TTG [ENA]
>W1610585619 LCWX01000216 Alphaproteobacteria Pseudovibrio sp. POLY-S9 [LCWX] 81847 81773 - Gln TTG [ENA] ¡û
>W1610716084 LLWE01000024 Alphaproteobacteria Pseudovibrio stylochi [LLWE] 465843 465917 + Gln TTG [ENA] ¡û
>W1610721694 LMCB01000122 Alphaproteobacteria Pseudovibrio axinellae [LMCB] 44812 44738 - Gln TTG [ENA] ¡û
>W1610721710 LMCC01000004 Alphaproteobacteria Pseudovibrio sp. Ad13 [LMCC] 372394 372468 + Gln TTG [ENA] ¡û
>W1610721772 LMCD01000005 Alphaproteobacteria Pseudovibrio sp. Ad14 [LMCD] 82671 82745 + Gln TTG [ENA] ¡û
>W1610721831 LMCE01000043 Alphaproteobacteria Pseudovibrio sp. Ad26 [LMCE] 82708 82782 + Gln TTG [ENA] ¡û
>W1610721890 LMCF01000021 Alphaproteobacteria Pseudovibrio sp. Ad37 [LMCF] 33853 33927 + Gln TTG [ENA] ¡û
>W1610721954 LMCG01000027 Alphaproteobacteria Pseudovibrio sp. Ad46 [LMCG] 249863 249937 + Gln TTG [ENA] ¡û
>W1610722002 LMCH01000002 Alphaproteobacteria Pseudovibrio sp. Ad5 [LMCH] 88897 88823 - Gln TTG [ENA] ¡û
>W1610722090 LMCI01000035 Alphaproteobacteria Pseudovibrio sp. W64 [LMCI] 111699 111773 + Gln TTG [ENA] ¡û
>W1610722173 LMCJ01000064 Alphaproteobacteria Pseudovibrio sp. W74 [LMCJ] 116786 116712 - Gln TTG [ENA] ¡û
>W1610722217 LMCK01000110 Alphaproteobacteria Pseudovibrio sp. WM33 [LMCK] 69062 68988 - Gln TTG [ENA] ¡û
>W1610938435 LUQC01000031 Alphaproteobacteria Rhodobacteraceae bacterium REDSEA-S34_B6 [LUQC] 4852 4778 - Gln TTG [ENA] ¡û
>W1710550682 FOFM01000003 Alphaproteobacteria Pseudovibrio axinellae [FOFM] 337260 337334 + Gln TTG [ENA] ¡û
>W1710567022 FOSK01000004 Alphaproteobacteria Pseudovibrio ascidiaceicola [FOSK] 90829 90755 - Gln TTG [ENA] ¡û
>W1710704810 LCWX01000216 Alphaproteobacteria Pseudovibrio sp. POLY-S9 [LCWX] 81847 81773 - Gln TTG [ENA] ¡û
Identical group No.806181 (2 seq.)
>ENV08000860 ABMK01032244 marine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 9 81 + Gln TTG [ENA] ¡û
>SRA1000880 SRR001048.240419 Line Islands Corals, microbial fraction from water of Palmyra (SRP000140) 9 81 + Gln TTG [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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