tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = GCG

HIT: 12 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.235734 (1 seq.)
>A17A001551 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 1509923 1509828 - Arg GCG - ¡û
Identical group No.240694 (15 seq.)
>A171003418 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 474204 474280 + Arg GCG - ¡û
>A171006032 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 1298470 1298394 - Arg GCG - ¡û
>WENV180050129 MPLU02112556 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 2583 2659 + Arg GCG [ENA] ¢þ
>WENV180053208 MPLV02000456 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 29885 29809 - Arg GCG [ENA] ¢þ
>WENV180059892 MPLX02138641 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 32698 32622 - Arg GCG [ENA] ¢þ
>WENV180091764 MPMF02218487 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 431 507 + Arg GCG [ENA] ¢þ
>WENV183797017 PVBE010297330 [PVBE] marine metagenome; water 32642 32566 - Arg GCG [ENA] ¢þ
>WENV170321252 CESR01040915 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2944 3020 + Arg GCG [ENA] ¢þ
>WENV170394962 CEUC01071430 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2926 3002 + Arg GCG [ENA] ¢þ
>WENV170625505 FUWD013199293 [FUWD] metagenome; unknown 2640 2564 - Arg GCG [ENA] ¢þ
>WENV170633735 FUWD013401678 [FUWD] metagenome; unknown 2640 2564 - Arg GCG [ENA] ¢þ
>WENV170882128 MDTC01144031 [MDTC] marine metagenome; seawater 30172 30096 - Arg GCG [ENA] ¢þ
>W1610005456 AJVJ01000041 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 2887 2964 + Arg GCG [ENA] ¡û
>W1610599334 LFLC01000010 Nitrososphaerota Nitrosopumilus sp. LS_AOA [LFLC] 80906 80831 - Arg GCG [ENA] ¡û
>W1610617258 LGTD01000634 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 801 877 + Arg GCG [ENA] ¡û
Identical group No.243872 (59 seq.)
>A171004101 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 403491 403567 + Arg GCG - ¡û
>WENV014688 AACY020408270 Marine microbial communities from Global Ocean Sampling (GOS) 166 87 - Arg GCG [ENA]
>WENV180045725 MPLT02005820 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 2301 2225 - Arg GCG [ENA] ¢þ
>WENV180050479 MPLU02143133 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 2372 2296 - Arg GCG [ENA] ¢þ
>WENV180050838 MPLU02174263 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 84 8 - Arg GCG [ENA] ¢þ
>WENV180053523 MPLV02022119 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 139 215 + Arg GCG [ENA] ¢þ
>WENV180057826 MPLX02024161 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 1089 1013 - Arg GCG [ENA] ¢þ
>WENV180360087 OBNT01003676 [OBNT] marine metagenome; Sea Water 388 312 - Arg GCG [ENA] ¢þ
>WENV180364352 OBOA01002809 [OBOA] marine metagenome; Deep Chlorophyll Maximum 917 841 - Arg GCG [ENA] ¢þ
>WENV181312839 OFJD01001455 [OFJD] marine metagenome; seawater 239 163 - Arg GCG [ENA] ¢þ
>WENV183801920 PVBE010716917 [PVBE] marine metagenome; water 103 27 - Arg GCG [ENA] ¢þ
>WENV183802503 PVBE010764586 [PVBE] marine metagenome; water 2185 2109 - Arg GCG [ENA] ¢þ
>WENV170173313 CEOQ01197956 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 296 220 - Arg GCG [ENA] ¢þ
>WENV170230167 CEQH01009720 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 377 453 + Arg GCG [ENA] ¢þ
>WENV170247488 CEQQ01041929 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 114 38 - Arg GCG [ENA] ¢þ
>WENV170256747 CEQX01124510 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 423 347 - Arg GCG [ENA] ¢þ
>WENV170260802 CERB01011469 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4685 4609 - Arg GCG [ENA] ¢þ
>WENV170405343 CEUG01091863 [CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 350 426 + Arg GCG [ENA] ¢þ
>WENV170409017 CEUI01138487 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 206 282 + Arg GCG [ENA] ¢þ
>WENV170420339 CEUM01326162 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1528 1452 - Arg GCG [ENA] ¢þ
>WENV170424570 CEUO01200897 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 322 398 + Arg GCG [ENA] ¢þ
>WENV170424713 CEUP01005609 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 84 8 - Arg GCG [ENA] ¢þ
>WENV170429287 CEUR01044818 [CEUR] marine metagenome genome assembly TARA_123_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 957 1033 + Arg GCG [ENA] ¢þ
>WENV170441938 CEUV01300082 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2840 2764 - Arg GCG [ENA] ¢þ
>WENV170444666 CEUX01196239 [CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1048 972 - Arg GCG [ENA] ¢þ
>WENV170460650 CEVC01167087 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1089 1013 - Arg GCG [ENA] ¢þ
>WENV170467858 CEVE01288582 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1615 1691 + Arg GCG [ENA] ¢þ
>WENV170486517 CEVN01296609 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 79 3 - Arg GCG [ENA] ¢þ
>WENV170499340 CEVT01147487 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 535 611 + Arg GCG [ENA] ¢þ
>WENV170504765 CEVW01001846 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 501 577 + Arg GCG [ENA] ¢þ
>WENV170530074 CEWJ01267697 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 97 173 + Arg GCG [ENA] ¢þ
>WENV021101 AACY020562526 Marine microbial communities from Global Ocean Sampling (GOS) 1492 1413 - Arg GCG [ENA]
>WENV170601015 FUWD010152612 [FUWD] metagenome; unknown 799 875 + Arg GCG [ENA] ¢þ
>WENV170618731 FUWD012983586 [FUWD] metagenome; unknown 331 407 + Arg GCG [ENA] ¢þ
>WENV170729886 LULG01003294 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 1132 1056 - Arg GCG [ENA] ¢þ
>WENV170736563 LULM01008494 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 416 340 - Arg GCG [ENA] ¢þ
>WENV170736974 LULN01000417 [LULN] marine metagenome; Red Sea water column Station 149 - depth 100m 9957 9881 - Arg GCG [ENA] ¢þ
>WENV170746217 LULZ01014792 [LULZ] marine metagenome; Red Sea water column Station 91 - depth 100m 321 245 - Arg GCG [ENA] ¢þ
>WENV170747664 LUMD01000002 [LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m 1767 1843 + Arg GCG [ENA] ¢þ
>WENV170748566 LUME01000008 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 93805 93729 - Arg GCG [ENA] ¢þ
>WENV170749821 LUMF01011494 [LUMF] marine metagenome; Red Sea water column Station 34 - depth 100m 717 641 - Arg GCG [ENA] ¢þ
>WENV170750504 LUMG01017360 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 369 445 + Arg GCG [ENA] ¢þ
>WENV170754133 LUML01000231 [LUML] marine metagenome; Red Sea water column Station 22 - depth 10m 10856 10780 - Arg GCG [ENA] ¢þ
>WENV170756578 LUMP01000155 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 34043 33967 - Arg GCG [ENA] ¢þ
>WENV170759290 LUMS01010231 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 298 374 + Arg GCG [ENA] ¢þ
>WENV170760930 LUMU01001736 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 103 27 - Arg GCG [ENA] ¢þ
>WENV170761154 LUMU01014354 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 21 97 + Arg GCG [ENA] ¢þ
>WENV170761163 LUMU01015294 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 79 3 - Arg GCG [ENA] ¢þ
>WENV170761275 LUMU01029717 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 520 444 - Arg GCG [ENA] ¢þ
>WENV170761572 LUMV01001671 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 126 202 + Arg GCG [ENA] ¢þ
>WENV170812846 MDSW01190105 [MDSW] marine metagenome; seawater 8348 8272 - Arg GCG [ENA] ¢þ
>WENV170904369 MDTE01011212 [MDTE] marine metagenome; seawater 2614 2538 - Arg GCG [ENA] ¢þ
>WENV170917281 MDTE01190544 [MDTE] marine metagenome; seawater 3196 3120 - Arg GCG [ENA] ¢þ
>W1910647523 LXWN01000001 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 45262 45338 + Arg GCG [ENA] ¡û
>WENV052206 AACY023012291 Marine microbial communities from Global Ocean Sampling (GOS) 454 375 - Arg GCG [ENA]
>WENV053672 AACY023111923 Marine microbial communities from Global Ocean Sampling (GOS) 386 465 + Arg GCG [ENA]
>WENV066787 AACY023662330 Marine microbial communities from Global Ocean Sampling (GOS) 455 534 + Arg GCG [ENA]
>W1610937721 LUPB01000047 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S31_B2 [LUPB] 9957 9881 - Arg GCG [ENA] ¡û
>W1610937780 LUPE01000040 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S43_B1 [LUPE] 103 27 - Arg GCG [ENA] ¡û
Identical group No.244718 (11 seq.)
>A171000236 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 504317 504392 + Arg GCG - ¡û
>A171003394 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 500464 500540 + Arg GCG - ¡û
>A171005925 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 1354547 1354471 - Arg GCG - ¡û
>W1910572973 JNVL01000032 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 7553 7477 - Arg GCG [ENA] ¡û
>W1910572996 JOKN01000057 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-N04 [JOKN] 2781 2705 - Arg GCG [ENA] ¡û
>W1910573213 JOSY01000015 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 201 277 + Arg GCG [ENA] ¡û
>W1910573254 JOTA01000017 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-B03 [JOTA] 21347 21423 + Arg GCG [ENA] ¡û
>W1910573303 JOTD01000040 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 56617 56693 + Arg GCG [ENA] ¡û
>W1610000550 ABEO01000002 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 98985 99060 + Arg GCG [ENA] ¡û
>W1610005417 AJVI01000014 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 2920 2996 + Arg GCG [ENA] ¡û
>W1610005437 AJVJ01000020 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 2920 2996 + Arg GCG [ENA] ¡û
Identical group No.244864 (1 seq.)
>A171006840 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 1758168 1758092 - Arg GCG - ¡û
Identical group No.245965 (3 seq.)
>A171001912 CP002408 Nitrososphaerota Candidatus Nitrososphaera gargensis Ga9.2 [CP002408] 1181421 1181346 - Arg GCG - ¡û
>WENV180691168 OCZS010069928 [OCZS] soil metagenome; soil 1 77 + Arg GCG [ENA] ¢þ
>W1910760418 MNFY01000242 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_3_50_5 [MNFY] 1953 1877 - Arg GCG [ENA] ¡û
Identical group No.245979 (2 seq.)
>A171006386 CP012850 Nitrososphaerota Candidatus Nitrosocosmicus oleophilus MY3 [CP012850] 2258269 2258345 + Arg GCG - ¡û
>WENV180691909 OCZS010261070 [OCZS] soil metagenome; soil 291 215 - Arg GCG [ENA] ¢þ
Identical group No.249446 (17 seq.)
>A171007069 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 876680 876605 - Arg GCG - ¡û
>WENV180051643 MPLU02233412 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 1676 1602 - Arg GCG [ENA] ¢þ
>WENV181092415 OEBK01000432 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 959 1033 + Arg GCG [ENA] ¢þ
>WENV183794123 PVBE010070084 [PVBE] marine metagenome; water 2243 2169 - Arg GCG [ENA] ¢þ
>WENV170145381 CENY01328188 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 700 774 + Arg GCG [ENA] ¢þ
>WENV170145981 CENZ01024572 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1904 1830 - Arg GCG [ENA] ¢þ
>WENV170155028 CEOF01400937 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 313 387 + Arg GCG [ENA] ¢þ
>WENV170272024 CERK01029620 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 597 671 + Arg GCG [ENA] ¢þ
>WENV170287092 CERW01263979 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 388 462 + Arg GCG [ENA] ¢þ
>WENV170323569 CESS01008683 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1142 1216 + Arg GCG [ENA] ¢þ
>WENV170504574 CEVV01335330 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 112 186 + Arg GCG [ENA] ¢þ
>WENV170508895 CEVX01297808 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 795 721 - Arg GCG [ENA] ¢þ
>WENV170532347 CEWO01034609 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 469 543 + Arg GCG [ENA] ¢þ
>WENV170617091 FUWD012914034 [FUWD] metagenome; unknown 881 955 + Arg GCG [ENA] ¢þ
>WENV170624855 FUWD013188036 [FUWD] metagenome; unknown 55 129 + Arg GCG [ENA] ¢þ
>WENV170909238 MDTE01075564 [MDTE] marine metagenome; seawater 2316 2242 - Arg GCG [ENA] ¢þ
>WENV069481 AACY023768827 Marine microbial communities from Global Ocean Sampling (GOS) 787 710 - Arg GCG [ENA]
Identical group No.259866 (2 seq.)
>A171004253 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 1700027 1700102 + Arg GCG - ¡û
>A171004325 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 572495 572570 + Arg GCG - ¡û
Identical group No.260288 (3 seq.)
>A171007472 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 495082 495158 + Arg GCG - ¡û
>WENV180295962 OBIZ01491051 [OBIZ] soil metagenome; soil 114 189 + Arg GCG [ENA] ¢þ
>WENV180352093 OBLQ010166089 [OBLQ] soil metagenome; soil 547 623 + Arg GCG [ENA] ¢þ
Identical group No.260967 (2 seq.)
>At0077 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 168851 168777 - Arg GCG [Ensembl] ¡û
>ENV004152 DQ397558 Environmental sample from ENV division of INSDC 41022 41101 + Arg GCG [ENA]
Identical group No.268544 (1 seq.)
>A171006055 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 1111212 1111137 - Arg GCG - ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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