tRNA genes clustered and arranged according to each identical group

Solar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000147)

Anticodon = GAG

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.187500 (11 seq.)
>W131063624 ANKZ01000001 Gammaproteobacteria Spiribacter salinus M19-40 [ANKZ] 910511 910427 - Leu GAG [ENA] ¡û
>W131171442 ARGF01000054 Gammaproteobacteria Arhodomonas aquaeolei DSM 8974 [ARGF] 73137 73221 + Leu GAG [ENA] ¡û
>w014154 AAOF01000015 Gammaproteobacteria Nitrococcus mobilis Nb-231 [AAOF] 33173 33092 - Leu GAG [ENA] ¡û
>ENV08001177 ABMR01015178 saltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA 18 102 + Leu GAG [ENA] ¡û
>WENV170682764 LFIK01001125 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 20352 20436 + Leu GAG [ENA] ¢þ
>WENV170701835 LKMJ01000046 [LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake 34434 34518 + Leu GAG [ENA] ¢þ
>WENV170703509 LKMJ01012841 [LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake 6492 6408 - Leu GAG [ENA] ¢þ
>SRA1001242 SRR001057.12773 Solar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000147) 18 102 + Leu GAG [SRA]
>W1810586386 QFFI01000007 Gammaproteobacteria Spiribacter halobius E85 [QFFI] 69457 69541 + Leu GAG [ENA] ¡û
>C131016218 CP005963 Gammaproteobacteria Spiribacter salinus M19-40 [CP005963] 629209 629293 + Leu GAG [Ensembl] ¡û
>W1710549084 FOEG01000002 Gammaproteobacteria Aquisalimonas asiatica [FOEG] 348065 347981 - Leu GAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK