tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = CAA

HIT: 23 Group(s).
Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.87940 (6 seq.)
>WENV170008203 AMZC01004395 [AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor 34 121 + Leu CAA [ENA] ¢þ
>WENV170562743 CZCB01004920 [CZCB] anaerobic digester metagenome; anaerobic digester 2991 2904 - Leu CAA [ENA] ¢þ
>WENV170684417 LFRM01037641 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 3172 3085 - Leu CAA [ENA] ¢þ
>WENV170968456 MTKW01009484 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 2626 2713 + Leu CAA [ENA] ¢þ
>C121008070 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 1714106 1714019 - Leu CAA [Ensembl] ¡û
>W1710594064 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 1472840 1472927 + Leu CAA [ENA] ¡û
Identical group No.92957 (3 seq.)
>WENV170676912 LDZS01003186 [LDZS] terrestrial metagenome; oil reservoir sample K3 20017 20104 + Leu CAA [ENA] ¢þ
>W1610613280 LGFQ01000006 Synergistota Synergistales bacterium 54_24 [LGFQ] 20017 20104 + Leu CAA [ENA] ¡û
>W1710734487 LGFQ01000006 Synergistota Synergistales bacterium 54_24 [LGFQ] 20017 20104 + Leu CAA [ENA] ¡û
Identical group No.92959 (3 seq.)
>WENV170676964 LDZS01003693 [LDZS] terrestrial metagenome; oil reservoir sample K3 3744 3831 + Leu CAA [ENA] ¢þ
>W09126643 ACJX01000221 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 96984 96897 - Leu CAA [ENA] ¡û
>W1710530835 FNPD01000004 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 155680 155593 - Leu CAA [ENA] ¡û
Identical group No.92961 (4 seq.)
>WENV170676984 LDZS01003874 [LDZS] terrestrial metagenome; oil reservoir sample K3 411 498 + Leu CAA [ENA] ¢þ
>C121005694 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 1578215 1578128 - Leu CAA [Ensembl] ¡û
>W1610613346 LGFS01000036 Synergistota Thermovirga lienii [LGFS] 411 498 + Leu CAA [ENA] ¡û
>W1710734553 LGFS01000036 Synergistota Thermovirga lienii [LGFS] 411 498 + Leu CAA [ENA] ¡û
Identical group No.109243 (1 seq.)
>W141278947 JAFY01000005 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 306120 306033 - Leu CAA [ENA] ¡û
Identical group No.116534 (7 seq.)
>C171050528 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1014457 1014543 + Leu CAA - ¡û
>WENV181914666 OGYF01000703 [OGYF] human gut metagenome; faeces 30182 30096 - Leu CAA [ENA] ¢þ
>WENV182031010 OHCS01001249 [OHCS] human gut metagenome; feces 8818 8732 - Leu CAA [ENA] ¢þ
>WENV182212535 OHQG01001255 [OHQG] human gut metagenome; feces 7722 7636 - Leu CAA [ENA] ¢þ
>WENV182215712 OHQM01001561 [OHQM] human gut metagenome; feces 7210 7124 - Leu CAA [ENA] ¢þ
>WENV182883649 OKSB01021864 [OKSB] human gut metagenome; faeces 1183 1097 - Leu CAA [ENA] ¢þ
>WENV182892253 OKSH01046720 [OKSH] human gut metagenome; faeces 356 442 + Leu CAA [ENA] ¢þ
Identical group No.119771 (3 seq.)
>W1711629567 MPPC01000018 Synergistota Aminobacterium sp. EBM-42 [MPPC] 55001 55087 + Leu CAA [ENA] ¡û
>WENV170724499 LSQX01307927 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 9625 9539 - Leu CAA [ENA] ¢þ
>C10100302 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 477552 477638 + Leu CAA [Ensembl] ¡û
Identical group No.122525 (3 seq.)
>WENV170679039 LDZU01006775 [LDZU] terrestrial metagenome; oil reservoir sample SB2 6640 6726 + Leu CAA [ENA] ¢þ
>W1610614486 LGHG01000026 Synergistota Synergistales bacterium 54_9 [LGHG] 6640 6726 + Leu CAA [ENA] ¡û
>W1710735467 LGHG01000026 Synergistota Synergistales bacterium 54_9 [LGHG] 6640 6726 + Leu CAA [ENA] ¡û
Identical group No.128546 (4 seq.)
>WENV181989346 OHAO01006807 [OHAO] human gut metagenome; faeces 1642 1556 - Leu CAA [ENA] ¢þ
>WENV183419576 OMAZ01009052 [OMAZ] human gut metagenome; feces 715 801 + Leu CAA [ENA] ¢þ
>W10113045 ADFP01000121 Synergistota Pyramidobacter piscolens W5455 [ADFP] 50513 50427 - Leu CAA [ENA] ¡û
>W11116272 ADFP01000121 Synergistota Pyramidobacter piscolens W5455 [ADFP] 50513 50427 - Leu CAA [ENA] ¡û
Identical group No.129529 (2 seq.)
>WENV180810415 ODJK01302860 [ODJK] human metagenome; G_DNA_Subgingival plaque 65 151 + Leu CAA [ENA] ¢þ
>C161104034 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 2124986 2124900 - Leu CAA - ¡û
Identical group No.130295 (1 seq.)
>W11138628 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 484822 484736 - Leu CAA [ENA] ¡û
Identical group No.146010 (2 seq.)
>W1711744519 MUHX01000045 Synergistota Pyramidobacter sp. C12-8 [MUHX] 7748 7834 + Leu CAA [ENA] ¡û
>WENV183764033 PPYE01312152 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 7897 7983 + Leu CAA [ENA] ¢þ
Identical group No.151455 (1 seq.)
>W141279016 JAFZ01000002 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 365858 365772 - Leu CAA [ENA] ¡û
Identical group No.158021 (3 seq.)
>W1711137621 LVBQ01000038 Synergistota Synergistales bacterium Syner_03 [LVBQ] 1952 1867 - Leu CAA [ENA] ¡û
>W1712039350 NFJQ01000001 Synergistota Cloacibacillus sp. An23 [NFJQ] 213537 213452 - Leu CAA [ENA] ¡û
>W1610948741 LVBQ01000038 Synergistota Synergistales bacterium Syner_03 [LVBQ] 1952 1867 - Leu CAA [ENA] ¡û
Identical group No.158487 (6 seq.)
>W141701213 JMKI01000037 Synergistota Synergistes jonesii [JMKI] 47208 47123 - Leu CAA [ENA] ¡û
>W1710629250 JPZQ01000046 Synergistota Synergistes jonesii [JPZQ] 233 148 - Leu CAA [ENA] ¡û
>W1710629294 JPZR01000036 Synergistota Synergistes jonesii [JPZR] 1852 1767 - Leu CAA [ENA] ¡û
>W1710629336 JPZS01000039 Synergistota Synergistes jonesii [JPZS] 235 150 - Leu CAA [ENA] ¡û
>W1710631819 JQEK01000007 Synergistota Synergistes jonesii [JQEK] 235 150 - Leu CAA [ENA] ¡û
>W1710631884 JQEL01000041 Synergistota Synergistes jonesii [JQEL] 235 150 - Leu CAA [ENA] ¡û
Identical group No.160052 (5 seq.)
>WENV181230546 OFEK01001458 [OFEK] activated sludge metagenome; Anaerobic digester 716 631 - Leu CAA [ENA] ¢þ
>WENV170678361 LDZT01014043 [LDZT] terrestrial metagenome; oil reservoir sample SB1 975 890 - Leu CAA [ENA] ¢þ
>WENV170678602 LDZU01003286 [LDZU] terrestrial metagenome; oil reservoir sample SB2 605 690 + Leu CAA [ENA] ¢þ
>W1610613713 LGGE01000036 Synergistota Synergistales bacterium 57_84 [LGGE] 975 890 - Leu CAA [ENA] ¡û
>W1710734866 LGGE01000036 Synergistota Synergistales bacterium 57_84 [LGGE] 975 890 - Leu CAA [ENA] ¡û
Identical group No.161711 (5 seq.)
>WENV181908682 OGYB01000289 [OGYB] human gut metagenome; faeces 25993 25908 - Leu CAA [ENA] ¢þ
>WENV182172632 OHMY01025728 [OHMY] human gut metagenome; feces 307 222 - Leu CAA [ENA] ¢þ
>WENV182537829 OIXH01020551 [OIXH] human gut metagenome; faeces 147 232 + Leu CAA [ENA] ¢þ
>WENV183038569 OLGB01000779 [OLGB] human gut metagenome; faeces 96 181 + Leu CAA [ENA] ¢þ
>W121000470 ACUH01000039 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 70025 70110 + Leu CAA [ENA] ¡û
Identical group No.166477 (3 seq.)
>W141146839 AWWC01000006 Synergistota Jonquetella sp. BV3C21 [AWWC] 109599 109514 - Leu CAA [ENA] ¡û
>W09132993 ACOO02000037 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 113851 113766 - Leu CAA [ENA] ¡û
>W121017473 AGRU01000001 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 218423 218338 - Leu CAA [ENA] ¡û
Identical group No.174556 (1 seq.)
>W121031640 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 1279960 1280045 + Leu CAA [ENA] ¡û
Identical group No.175566 (1 seq.)
>W09108906 ABTR01000002 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 230174 230089 - Leu CAA [ENA] ¡û
Identical group No.175567 (3 seq.)
>WENV181409141 OGCI01000009 [OGCI] hot springs metagenome; Hot spring water 228377 228292 - Leu CAA [ENA] ¢þ
>W09110128 ABUW01000003 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 228861 228776 - Leu CAA [ENA] ¡û
>C10113019 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 592932 592847 - Leu CAA [Ensembl] ¡û
Identical group No.176398 (1 seq.)
>W1710608694 FXBB01000013 Synergistota Dethiosulfovibrio salsuginis [FXBB] 35141 35056 - Leu CAA [ENA] ¡û
Identical group No.178518 (1 seq.)
>W141452013 JFBR01000001 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 967102 967187 + Leu CAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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