tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = GGT

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.461176 (34 seq.)
>W1711137639 LVBQ01000164 Synergistota Synergistales bacterium Syner_03 [LVBQ] 1723 1798 + Thr GGT [ENA] ¡û
>W1711629561 MPPC01000012 Synergistota Aminobacterium sp. EBM-42 [MPPC] 20840 20915 + Thr GGT [ENA] ¡û
>WENV180346162 OBLN01033122 [OBLN] sediment metagenome; sediment 709 784 + Thr GGT [ENA] ¢þ
>WENV180735265 ODGZ01125313 [ODGZ] human metagenome; G_DNA_Supragingival plaque 191 266 + Thr GGT [ENA] ¢þ
>WENV180809559 ODJK01024519 [ODJK] human metagenome; G_DNA_Subgingival plaque 970 1045 + Thr GGT [ENA] ¢þ
>WENV180944290 ODUC01012398 [ODUC] human metagenome; G_DNA_Supragingival plaque 313 238 - Thr GGT [ENA] ¢þ
>WENV180976598 ODUY01160359 [ODUY] human metagenome; G_DNA_Supragingival plaque 164 239 + Thr GGT [ENA] ¢þ
>WENV180981557 ODVE01030980 [ODVE] human metagenome; G_DNA_Supragingival plaque 715 790 + Thr GGT [ENA] ¢þ
>WENV181009739 ODWE01179418 [ODWE] human metagenome; G_DNA_Supragingival plaque 189 114 - Thr GGT [ENA] ¢þ
>WENV181050046 ODYD01005193 [ODYD] human metagenome; G_DNA_Supragingival plaque 2308 2383 + Thr GGT [ENA] ¢þ
>WENV181076505 OEAP01006295 [OEAP] human metagenome; G_DNA_Supragingival plaque 2008 2083 + Thr GGT [ENA] ¢þ
>WENV181182502 OEJV01013235 [OEJV] human metagenome; G_DNA_Supragingival plaque 112 37 - Thr GGT [ENA] ¢þ
>WENV181230642 OFEK01001989 [OFEK] activated sludge metagenome; Anaerobic digester 11827 11902 + Thr GGT [ENA] ¢þ
>WENV181409947 OGCI01000973 [OGCI] hot springs metagenome; Hot spring water 27132 27207 + Thr GGT [ENA] ¢þ
>W141278939 JAFY01000005 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 463588 463513 - Thr GGT [ENA] ¡û
>W141279024 JAFZ01000004 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 103429 103354 - Thr GGT [ENA] ¡û
>WENV183514347 OMKS01016815 [OMKS] sediment metagenome; hot spring sediment 1834 1909 + Thr GGT [ENA] ¢þ
>WENV170656757 JTFO01040643 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 507 432 - Thr GGT [ENA] ¢þ
>WENV170678355 LDZT01014033 [LDZT] terrestrial metagenome; oil reservoir sample SB1 8705 8780 + Thr GGT [ENA] ¢þ
>WENV170678627 LDZU01003414 [LDZU] terrestrial metagenome; oil reservoir sample SB2 267 192 - Thr GGT [ENA] ¢þ
>WENV170725811 LSQX01357631 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 5077 5002 - Thr GGT [ENA] ¢þ
>WENV170967249 MTKW01000575 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 20309 20384 + Thr GGT [ENA] ¢þ
>WENV170972554 MTKX01034746 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 244 169 - Thr GGT [ENA] ¢þ
>WENV170974564 MTKY01065776 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 905 980 + Thr GGT [ENA] ¢þ
>WENV170976880 MTKZ01013685 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 6939 7014 + Thr GGT [ENA] ¢þ
>W09110158 ABUW01000009 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 1982 1907 - Thr GGT [ENA] ¡û
>C10100294 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 325516 325591 + Thr GGT [Ensembl] ¡û
>C10112995 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1585433 1585358 - Thr GGT [Ensembl] ¡û
>W121031608 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 285717 285792 + Thr GGT [ENA] ¡û
>W1610613707 LGGE01000026 Synergistota Synergistales bacterium 57_84 [LGGE] 8705 8780 + Thr GGT [ENA] ¡û
>W1610614165 LGGV01000039 Synergistota Synergistales bacterium 58_81 [LGGV] 267 192 - Thr GGT [ENA] ¡û
>W1610948759 LVBQ01000164 Synergistota Synergistales bacterium Syner_03 [LVBQ] 1723 1798 + Thr GGT [ENA] ¡û
>W1710734860 LGGE01000026 Synergistota Synergistales bacterium 57_84 [LGGE] 8705 8780 + Thr GGT [ENA] ¡û
>W1710735248 LGGV01000039 Synergistota Synergistales bacterium 58_81 [LGGV] 267 192 - Thr GGT [ENA] ¡û
Identical group No.473788 (17 seq.)
>W1712039366 NFJQ01000005 Synergistota Cloacibacillus sp. An23 [NFJQ] 230427 230502 + Thr GGT [ENA] ¡û
>C171050526 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 570234 570309 + Thr GGT - ¡û
>WENV180095987 MTBK01100724 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 262 337 + Thr GGT [ENA] ¢þ
>WENV181081336 OEAS01179642 [OEAS] human metagenome; G_DNA_Supragingival plaque 244 319 + Thr GGT [ENA] ¢þ
>WENV181091612 OEBC01058872 [OEBC] human metagenome; G_DNA_Supragingival plaque 683 758 + Thr GGT [ENA] ¢þ
>WENV181642086 OGNF01069544 [OGNF] metagenome; Human gut stool 202 277 + Thr GGT [ENA] ¢þ
>WENV181910503 OGYC01014341 [OGYC] human gut metagenome; faeces 1481 1406 - Thr GGT [ENA] ¢þ
>WENV181915062 OGYF01002634 [OGYF] human gut metagenome; faeces 1083 1158 + Thr GGT [ENA] ¢þ
>WENV182031044 OHCS01001668 [OHCS] human gut metagenome; feces 5666 5591 - Thr GGT [ENA] ¢þ
>WENV182180680 OHNO01006488 [OHNO] human gut metagenome; feces 1450 1525 + Thr GGT [ENA] ¢þ
>WENV182215852 OHQM01004573 [OHQM] human gut metagenome; feces 700 775 + Thr GGT [ENA] ¢þ
>WENV183713893 PDWI01158257 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1432 1357 - Thr GGT [ENA] ¢þ
>WENV170656248 JTFO01006440 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 567 492 - Thr GGT [ENA] ¢þ
>WENV170717284 LSQX01030192 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 8045 7970 - Thr GGT [ENA] ¢þ
>W11138626 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 648873 648798 - Thr GGT [ENA] ¡û
>C121005668 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 470896 470971 + Thr GGT [Ensembl] ¡û
>W1710608718 FXBB01000049 Synergistota Dethiosulfovibrio salsuginis [FXBB] 14034 14109 + Thr GGT [ENA] ¡û
Identical group No.486063 (10 seq.)
>WENV170563755 CZCB01028390 [CZCB] anaerobic digester metagenome; anaerobic digester 5509 5434 - Thr GGT [ENA] ¢þ
>WENV170676915 LDZS01003195 [LDZS] terrestrial metagenome; oil reservoir sample K3 26028 26103 + Thr GGT [ENA] ¢þ
>WENV170686671 LFRM01158404 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 327 252 - Thr GGT [ENA] ¢þ
>WENV170688472 LFRM01247193 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 3057 3132 + Thr GGT [ENA] ¢þ
>W09126634 ACJX01000177 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 661 586 - Thr GGT [ENA] ¡û
>C121008044 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 202466 202541 + Thr GGT [Ensembl] ¡û
>W1610613283 LGFQ01000015 Synergistota Synergistales bacterium 54_24 [LGFQ] 26028 26103 + Thr GGT [ENA] ¡û
>W1710530846 FNPD01000012 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 17188 17113 - Thr GGT [ENA] ¡û
>W1710594073 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 874899 874824 - Thr GGT [ENA] ¡û
>W1710734490 LGFQ01000015 Synergistota Synergistales bacterium 54_24 [LGFQ] 26028 26103 + Thr GGT [ENA] ¡û
Identical group No.491399 (13 seq.)
>WENV181908664 OGYB01000268 [OGYB] human gut metagenome; faeces 2312 2237 - Thr GGT [ENA] ¢þ
>WENV182143719 OHKV01016682 [OHKV] human gut metagenome; feces 669 744 + Thr GGT [ENA] ¢þ
>WENV182172571 OHMY01017753 [OHMY] human gut metagenome; feces 1209 1284 + Thr GGT [ENA] ¢þ
>WENV170657062 JTFO01074398 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 197 122 - Thr GGT [ENA] ¢þ
>W141452011 JFBR01000001 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 529877 529952 + Thr GGT [ENA] ¡û
>W09108937 ABTR01000025 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 16283 16358 + Thr GGT [ENA] ¡û
>W141701203 JMKI01000034 Synergistota Synergistes jonesii [JMKI] 2203 2128 - Thr GGT [ENA] ¡û
>W121000461 ACUH01000007 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 96019 96094 + Thr GGT [ENA] ¡û
>W1710629244 JPZQ01000034 Synergistota Synergistes jonesii [JPZQ] 1644 1569 - Thr GGT [ENA] ¡û
>W1710629288 JPZR01000026 Synergistota Synergistes jonesii [JPZR] 1645 1570 - Thr GGT [ENA] ¡û
>W1710629330 JPZS01000028 Synergistota Synergistes jonesii [JPZS] 1644 1569 - Thr GGT [ENA] ¡û
>W1710631823 JQEK01000018 Synergistota Synergistes jonesii [JQEK] 1644 1569 - Thr GGT [ENA] ¡û
>W1710631878 JQEL01000031 Synergistota Synergistes jonesii [JQEL] 1644 1569 - Thr GGT [ENA] ¡û
Identical group No.530742 (7 seq.)
>W1711137567 LVBO01000316 Synergistota Synergistales bacterium Syner_01 [LVBO] 2959 2884 - Thr GGT [ENA] ¡û
>W131157330 AQRZ01000046 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 18430 18505 + Thr GGT [ENA] ¡û
>WENV180731713 ODGW01007823 [ODGW] human metagenome; G_DNA_Supragingival plaque 1143 1068 - Thr GGT [ENA] ¢þ
>WENV180751397 ODHS01048871 [ODHS] human metagenome; G_DNA_Supragingival plaque 111 186 + Thr GGT [ENA] ¢þ
>WENV180797256 ODJB01041433 [ODJB] human metagenome; G_DNA_Supragingival plaque 471 546 + Thr GGT [ENA] ¢þ
>WENV181312203 OFJB01055015 [OFJB] sludge metagenome; sludge 561 486 - Thr GGT [ENA] ¢þ
>W1610948687 LVBO01000316 Synergistota Synergistales bacterium Syner_01 [LVBO] 2959 2884 - Thr GGT [ENA] ¡û
Identical group No.541234 (1 seq.)
>W11300461 ADFP01000074 Synergistota Pyramidobacter piscolens W5455 [ADFP] 13059 12984 - Thr GGT [ENA] ¡û
Identical group No.553402 (3 seq.)
>W141146836 AWWC01000006 Synergistota Jonquetella sp. BV3C21 [AWWC] 39041 39116 + Thr GGT [ENA] ¡û
>W09132990 ACOO02000037 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 42397 42472 + Thr GGT [ENA] ¡û
>W121017470 AGRU01000001 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 141814 141889 + Thr GGT [ENA] ¡û
Identical group No.603106 (2 seq.)
>W1711137602 LVBP01000282 Synergistota Synergistales bacterium Syner_02 [LVBP] 23448 23373 - Thr GGT [ENA] ¡û
>W1610948722 LVBP01000282 Synergistota Synergistales bacterium Syner_02 [LVBP] 23448 23373 - Thr GGT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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