tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = GTA

HIT: 21 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.156217 (13 seq.)
>C171050524 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 564234 564319 + Tyr GTA - ¡û
>C171050525 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 570101 570186 + Tyr GTA - ¡û
>WENV181637743 OGNB01035962 [OGNB] metagenome; Human gut stool 607 522 - Tyr GTA [ENA] ¢þ
>WENV181642085 OGNF01069544 [OGNF] metagenome; Human gut stool 69 154 + Tyr GTA [ENA] ¢þ
>WENV181910502 OGYC01014341 [OGYC] human gut metagenome; faeces 1614 1529 - Tyr GTA [ENA] ¢þ
>WENV181915061 OGYF01002634 [OGYF] human gut metagenome; faeces 950 1035 + Tyr GTA [ENA] ¢þ
>WENV181915235 OGYF01004181 [OGYF] human gut metagenome; faeces 5741 5656 - Tyr GTA [ENA] ¢þ
>WENV182031043 OHCS01001668 [OHCS] human gut metagenome; feces 5799 5714 - Tyr GTA [ENA] ¢þ
>WENV182180604 OHNO01003846 [OHNO] human gut metagenome; feces 930 1015 + Tyr GTA [ENA] ¢þ
>WENV182180679 OHNO01006488 [OHNO] human gut metagenome; feces 1317 1402 + Tyr GTA [ENA] ¢þ
>WENV182212922 OHQG01017514 [OHQG] human gut metagenome; feces 623 538 - Tyr GTA [ENA] ¢þ
>WENV182215851 OHQM01004573 [OHQM] human gut metagenome; feces 567 652 + Tyr GTA [ENA] ¢þ
>WENV182881577 OKSA01016771 [OKSA] human gut metagenome; faeces 233 148 - Tyr GTA [ENA] ¢þ
Identical group No.157752 (2 seq.)
>C121008043 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 202376 202461 + Tyr GTA [Ensembl] ¡û
>W1710594072 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 874989 874904 - Tyr GTA [ENA] ¡û
Identical group No.158022 (2 seq.)
>W1712039365 NFJQ01000005 Synergistota Cloacibacillus sp. An23 [NFJQ] 230302 230387 + Tyr GTA [ENA] ¡û
>WENV180224118 OBBI01065932 [OBBI] human gut metagenome; human gut 17 102 + Tyr GTA [ENA] ¢þ
Identical group No.158381 (3 seq.)
>W1711629560 MPPC01000012 Synergistota Aminobacterium sp. EBM-42 [MPPC] 20738 20823 + Tyr GTA [ENA] ¡û
>WENV170725810 LSQX01357631 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 5179 5094 - Tyr GTA [ENA] ¢þ
>C10100293 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 325414 325499 + Tyr GTA [Ensembl] ¡û
Identical group No.158485 (6 seq.)
>W141701194 JMKI01000016 Synergistota Synergistes jonesii [JMKI] 2633 2718 + Tyr GTA [ENA] ¡û
>W1710629237 JPZQ01000021 Synergistota Synergistes jonesii [JPZQ] 1759 1844 + Tyr GTA [ENA] ¡û
>W1710629281 JPZR01000016 Synergistota Synergistes jonesii [JPZR] 1759 1844 + Tyr GTA [ENA] ¡û
>W1710629323 JPZS01000016 Synergistota Synergistes jonesii [JPZS] 1764 1849 + Tyr GTA [ENA] ¡û
>W1710631840 JQEK01000044 Synergistota Synergistes jonesii [JQEK] 12175 12090 - Tyr GTA [ENA] ¡û
>W1710631871 JQEL01000019 Synergistota Synergistes jonesii [JQEL] 1759 1844 + Tyr GTA [ENA] ¡û
Identical group No.158486 (18 seq.)
>WENV181908662 OGYB01000268 [OGYB] human gut metagenome; faeces 3978 3893 - Tyr GTA [ENA] ¢þ
>WENV181908663 OGYB01000268 [OGYB] human gut metagenome; faeces 2441 2356 - Tyr GTA [ENA] ¢þ
>WENV182143718 OHKV01016682 [OHKV] human gut metagenome; feces 540 625 + Tyr GTA [ENA] ¢þ
>WENV182172570 OHMY01017753 [OHMY] human gut metagenome; feces 1080 1165 + Tyr GTA [ENA] ¢þ
>WENV182220861 OHQS01011477 [OHQS] human gut metagenome; feces 182 97 - Tyr GTA [ENA] ¢þ
>WENV182274756 OHUK01009012 [OHUK] human gut metagenome; feces 546 631 + Tyr GTA [ENA] ¢þ
>WENV182537760 OIXH01016974 [OIXH] human gut metagenome; faeces 177 92 - Tyr GTA [ENA] ¢þ
>WENV183039256 OLGB01004700 [OLGB] human gut metagenome; faeces 9769 9854 + Tyr GTA [ENA] ¢þ
>W141452009 JFBR01000001 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 526966 527051 + Tyr GTA [ENA] ¡û
>W141452010 JFBR01000001 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 529748 529833 + Tyr GTA [ENA] ¡û
>W141701202 JMKI01000034 Synergistota Synergistes jonesii [JMKI] 2311 2226 - Tyr GTA [ENA] ¡û
>W121000459 ACUH01000007 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 94353 94438 + Tyr GTA [ENA] ¡û
>W121000460 ACUH01000007 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 95890 95975 + Tyr GTA [ENA] ¡û
>W1710629243 JPZQ01000034 Synergistota Synergistes jonesii [JPZQ] 1752 1667 - Tyr GTA [ENA] ¡û
>W1710629287 JPZR01000026 Synergistota Synergistes jonesii [JPZR] 1753 1668 - Tyr GTA [ENA] ¡û
>W1710629329 JPZS01000028 Synergistota Synergistes jonesii [JPZS] 1752 1667 - Tyr GTA [ENA] ¡û
>W1710631822 JQEK01000018 Synergistota Synergistes jonesii [JQEK] 1752 1667 - Tyr GTA [ENA] ¡û
>W1710631877 JQEL01000031 Synergistota Synergistes jonesii [JQEL] 1752 1667 - Tyr GTA [ENA] ¡û
Identical group No.160048 (3 seq.)
>WENV170676914 LDZS01003195 [LDZS] terrestrial metagenome; oil reservoir sample K3 25933 26018 + Tyr GTA [ENA] ¢þ
>W1610613282 LGFQ01000015 Synergistota Synergistales bacterium 54_24 [LGFQ] 25933 26018 + Tyr GTA [ENA] ¡û
>W1710734489 LGFQ01000015 Synergistota Synergistales bacterium 54_24 [LGFQ] 25933 26018 + Tyr GTA [ENA] ¡û
Identical group No.164844 (5 seq.)
>W1711744500 MUHX01000015 Synergistota Pyramidobacter sp. C12-8 [MUHX] 43843 43928 + Tyr GTA [ENA] ¡û
>WENV181988990 OHAO01001947 [OHAO] human gut metagenome; faeces 11770 11685 - Tyr GTA [ENA] ¢þ
>WENV183763940 PPYE01311267 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 5467 5552 + Tyr GTA [ENA] ¢þ
>W10113029 ADFP01000074 Synergistota Pyramidobacter piscolens W5455 [ADFP] 13152 13067 - Tyr GTA [ENA] ¡û
>W11116256 ADFP01000074 Synergistota Pyramidobacter piscolens W5455 [ADFP] 13152 13067 - Tyr GTA [ENA] ¡û
Identical group No.164861 (1 seq.)
>W11138625 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 648969 648884 - Tyr GTA [ENA] ¡û
Identical group No.166472 (3 seq.)
>W141146835 AWWC01000006 Synergistota Jonquetella sp. BV3C21 [AWWC] 38952 39037 + Tyr GTA [ENA] ¡û
>W09132989 ACOO02000037 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 42308 42393 + Tyr GTA [ENA] ¡û
>W121017469 AGRU01000001 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 141725 141810 + Tyr GTA [ENA] ¡û
Identical group No.167248 (3 seq.)
>WENV183713892 PDWI01158257 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1544 1459 - Tyr GTA [ENA] ¢þ
>WENV170656247 JTFO01006440 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 672 587 - Tyr GTA [ENA] ¢þ
>W1710608717 FXBB01000049 Synergistota Dethiosulfovibrio salsuginis [FXBB] 13928 14013 + Tyr GTA [ENA] ¡û
Identical group No.168053 (2 seq.)
>W131157329 AQRZ01000046 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 18326 18411 + Tyr GTA [ENA] ¡û
>WENV181312202 OFJB01055015 [OFJB] sludge metagenome; sludge 665 580 - Tyr GTA [ENA] ¢þ
Identical group No.169229 (3 seq.)
>W1711137638 LVBQ01000164 Synergistota Synergistales bacterium Syner_03 [LVBQ] 1602 1687 + Tyr GTA [ENA] ¡û
>WENV170656902 JTFO01058880 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 341 426 + Tyr GTA [ENA] ¢þ
>W1610948758 LVBQ01000164 Synergistota Synergistales bacterium Syner_03 [LVBQ] 1602 1687 + Tyr GTA [ENA] ¡û
Identical group No.169275 (2 seq.)
>W09126633 ACJX01000177 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 751 666 - Tyr GTA [ENA] ¡û
>W1710530845 FNPD01000012 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 17278 17193 - Tyr GTA [ENA] ¡û
Identical group No.172852 (2 seq.)
>WENV170657061 JTFO01074398 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 300 215 - Tyr GTA [ENA] ¢þ
>W09108936 ABTR01000025 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 16183 16268 + Tyr GTA [ENA] ¡û
Identical group No.174555 (4 seq.)
>WENV181409946 OGCI01000973 [OGCI] hot springs metagenome; Hot spring water 27035 27120 + Tyr GTA [ENA] ¢þ
>W09110157 ABUW01000009 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 2079 1994 - Tyr GTA [ENA] ¡û
>C10112994 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1585530 1585445 - Tyr GTA [Ensembl] ¡û
>W121031607 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 285621 285706 + Tyr GTA [ENA] ¡û
Identical group No.176617 (1 seq.)
>W141278938 JAFY01000005 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 463691 463606 - Tyr GTA [ENA] ¡û
Identical group No.178435 (1 seq.)
>C121005667 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 470803 470888 + Tyr GTA [Ensembl] ¡û
Identical group No.178516 (1 seq.)
>W141279023 JAFZ01000004 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 103529 103444 - Tyr GTA [ENA] ¡û
Identical group No.189751 (9 seq.)
>W1711137591 LVBP01000203 Synergistota Synergistales bacterium Syner_02 [LVBP] 10296 10380 + Tyr GTA [ENA] ¡û
>WENV181230641 OFEK01001989 [OFEK] activated sludge metagenome; Anaerobic digester 11728 11812 + Tyr GTA [ENA] ¢þ
>WENV170678354 LDZT01014033 [LDZT] terrestrial metagenome; oil reservoir sample SB1 8606 8690 + Tyr GTA [ENA] ¢þ
>WENV170678626 LDZU01003414 [LDZU] terrestrial metagenome; oil reservoir sample SB2 366 282 - Tyr GTA [ENA] ¢þ
>W1610613706 LGGE01000026 Synergistota Synergistales bacterium 57_84 [LGGE] 8606 8690 + Tyr GTA [ENA] ¡û
>W1610614164 LGGV01000039 Synergistota Synergistales bacterium 58_81 [LGGV] 366 282 - Tyr GTA [ENA] ¡û
>W1610948711 LVBP01000203 Synergistota Synergistales bacterium Syner_02 [LVBP] 10296 10380 + Tyr GTA [ENA] ¡û
>W1710734859 LGGE01000026 Synergistota Synergistales bacterium 57_84 [LGGE] 8606 8690 + Tyr GTA [ENA] ¡û
>W1710735247 LGGV01000039 Synergistota Synergistales bacterium 58_81 [LGGV] 366 282 - Tyr GTA [ENA] ¡û
Identical group No.191349 (5 seq.)
>W1711137601 LVBP01000282 Synergistota Synergistales bacterium Syner_02 [LVBP] 23547 23463 - Tyr GTA [ENA] ¡û
>WENV180346161 OBLN01033122 [OBLN] sediment metagenome; sediment 610 694 + Tyr GTA [ENA] ¢þ
>WENV170717283 LSQX01030192 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 8144 8060 - Tyr GTA [ENA] ¢þ
>WENV170725831 LSQX01358336 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 375 459 + Tyr GTA [ENA] ¢þ
>W1610948721 LVBP01000282 Synergistota Synergistales bacterium Syner_02 [LVBP] 23547 23463 - Tyr GTA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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