tRNA genes clustered and arranged according to each identical group

The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)

Anticodon = CTC

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.202220 (20 seq.)
>WENV180250426 OBEQ010282472 [OBEQ] groundwater metagenome; groundwater 252 176 - Glu CTC [ENA] ¢þ
>WENV180266169 OBEQ011727362 [OBEQ] groundwater metagenome; groundwater 70 146 + Glu CTC [ENA] ¢þ
>WENV180692056 OCZS010330230 [OCZS] soil metagenome; soil 183 107 - Glu CTC [ENA] ¢þ
>WENV180694936 OCZS012831614 [OCZS] soil metagenome; soil 120 45 - Glu CTC [ENA] ¢þ
>WENV181169813 OEIV010010740 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 1353 1429 + Glu CTC [ENA] ¢þ
>WENV181316633 OFJU01024486 [OFJU] marine metagenome; seawater 238 314 + Glu CTC [ENA] ¢þ
>WENV170226862 CEQF01022278 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 102 178 + Glu CTC [ENA] ¢þ
>WENV170227897 CEQF01149434 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 453 529 + Glu CTC [ENA] ¢þ
>WENV170273644 CERL01112480 [CERL] marine metagenome genome assembly TARA_068_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 399 475 + Glu CTC [ENA] ¢þ
>WENV170294422 CESC01074066 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 237 313 + Glu CTC [ENA] ¢þ
>WENV170299626 CESG01046519 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 123 199 + Glu CTC [ENA] ¢þ
>WENV170388753 CETZ01121631 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 629 553 - Glu CTC [ENA] ¢þ
>WENV170432294 CEUS01080756 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 719 795 + Glu CTC [ENA] ¢þ
>WENV170450935 CEUZ01151273 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2384 2308 - Glu CTC [ENA] ¢þ
>WENV170454311 CEVA01031112 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 965 1041 + Glu CTC [ENA] ¢þ
>WENV170648900 JRHI01003541 [JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced 8267 8191 - Glu CTC [ENA] ¢þ
>WENV170772334 LXNI01024236 [LXNI] sponge metagenome; marine sponge reef 643 719 + Glu CTC [ENA] ¢þ
>WENV170774058 LXNJ01021220 [LXNJ] sponge metagenome; marine sponge reef 802 726 - Glu CTC [ENA] ¢þ
>WENV170957316 MKWU01000001 [MKWU] sponge metagenome; 933060 932984 - Glu CTC [ENA] ¢þ
>SRA1003328 SRR002326.394052 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 146 222 + Glu CTC [SRA]
Identical group No.248748 (1 seq.)
>SRA1004233 SRR002328.214609 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 115 39 - Glu CTC [SRA]
Identical group No.290542 (24 seq.)
>W1710874699 LMNV01000002 Actinomycetota Frondihabitans sp. Leaf304 [LMNV] 809885 809810 - Glu CTC [ENA] ¡û
>WENV180016055 FSTY01000416 [FSTY] metagenome; soil 10726 10799 + Glu CTC [ENA] ¢þ
>WENV180016070 FSTY01000686 [FSTY] metagenome; soil 2639 2564 - Glu CTC [ENA] ¢þ
>WENV180017263 FSWR01000028 [FSWR] metagenome; soil 7508 7435 - Glu CTC [ENA] ¢þ
>WENV180017294 FSWR01000065 [FSWR] metagenome; soil 7353 7426 + Glu CTC [ENA] ¢þ
>WENV180017649 FSXL01000255 [FSXL] metagenome; soil 8976 9049 + Glu CTC [ENA] ¢þ
>WENV180017823 FSXQ01003668 [FSXQ] metagenome; soil 71227 71300 + Glu CTC [ENA] ¢þ
>WENV180023601 FTIC01119372 [FTIC] metagenome; soil 193 118 - Glu CTC [ENA] ¢þ
>WENV180023820 FTIF01000925 [FTIF] metagenome; soil 28308 28381 + Glu CTC [ENA] ¢þ
>WENV180026456 FTIT01303690 [FTIT] metagenome; soil 147 74 - Glu CTC [ENA] ¢þ
>WENV180029120 FTJI01054602 [FTJI] metagenome; soil 2 75 + Glu CTC [ENA] ¢þ
>WENV180033492 FTKK01081780 [FTKK] metagenome; soil 3162 3087 - Glu CTC [ENA] ¢þ
>WENV180034641 FTKR01054942 [FTKR] metagenome; soil 2 75 + Glu CTC [ENA] ¢þ
>WENV170561758 CZCA01026798 [CZCA] anaerobic digester metagenome; anaerobic digester 172 97 - Glu CTC [ENA] ¢þ
>WENV170570770 FLOH01000022 [FLOH] marine metagenome; water 113661 113734 + Glu CTC [ENA] ¢þ
>C181143987 CP026951 Actinomycetota Salinibacterium hongtaonis CGMCC 1.16371 [CP026951] 1909239 1909166 - Glu CTC - ¡û
>C191011723 CP014619 Actinomycetota Frondihabitans sp. 762G35 [CP014619] 1999797 1999724 - Glu CTC - ¡û
>W1810169250 PJJX01000002 Actinomycetota Terrimesophilobacter mesophilus CGMCC1.10440 [PJJX] 909649 909576 - Glu CTC [ENA] ¡û
>SRA1003421 SRR002326.456707 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 147 220 + Glu CTC [SRA]
>SRA1003677 SRR002327.115614 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 55 128 + Glu CTC [SRA]
>W1810364705 PVTL01000003 Actinomycetota Glaciihabitans tibetensis CGMCC 1.12484 [PVTL] 379239 379312 + Glu CTC [ENA] ¡û
>W1810568854 QEEX01000001 Actinomycetota Salinibacterium hongtaonis S1194 [QEEX] 894794 894721 - Glu CTC [ENA] ¡û
>C161073140 CP014513 Actinomycetota Frondihabitans sp. PAMC 28766 [CP014513] 3279938 3279863 - Glu CTC [Ensembl] ¡û
>W1610737045 LMNV01000002 Actinomycetota Frondihabitans sp. Leaf304 [LMNV] 809885 809810 - Glu CTC [ENA] ¡û
Identical group No.308592 (10 seq.)
>WENV180291957 OBIV01243099 [OBIV] soil metagenome; Clay 281 353 + Glu CTC [ENA] ¢þ
>WENV180693752 OCZS011538750 [OCZS] soil metagenome; soil 151 78 - Glu CTC [ENA] ¢þ
>WENV181193272 OEPS011695936 [OEPS] soil metagenome; soil 73 1 - Glu CTC [ENA] ¢þ
>WENV183666055 ORJL010516103 [ORJL] groundwater metagenome; groundwater 622 695 + Glu CTC [ENA] ¢þ
>WENV183679887 ORMF010117836 [ORMF] groundwater metagenome; groundwater 74 -1 - Glu CTC [ENA] ¢þ
>WENV183683955 ORMF010643956 [ORMF] groundwater metagenome; groundwater 1338 1266 - Glu CTC [ENA] ¢þ
>C09106262 AP009153 Gemmatimonadota Gemmatimonas aurantiaca T-27 [AP009153] 2470351 2470278 - Glu CTC [Ensembl] ¡û
>SRA1003320 SRR002326.387381 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 177 250 + Glu CTC [SRA]
>C151017000 CP007128 Gemmatimonadota Gemmatirosa kalamazoonensis KBS708 [CP007128] 4251841 4251769 - Glu CTC [Ensembl] ¡û
>WENV077818 AAFX01111442 Soil microbial communities from Minnesota Farm 298 375 + Glu CTC [ENA]
Identical group No.335558 (1 seq.)
>SRA1003777 SRR002327.178290 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 138 63 - Glu CTC [SRA]
Identical group No.421980 (1 seq.)
>SRA1003211 SRR002326.307856 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 39 113 + Glu CTC [SRA]
Identical group No.421985 (1 seq.)
>SRA1003237 SRR002326.328117 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 130 204 + Glu CTC [SRA]
Identical group No.452614 (2 seq.)
>WENV181389070 OFRM01076483 [OFRM] wastewater metagenome; Exp Tend VB 0WW 336 262 - Glu CTC [ENA] ¢þ
>SRA1004265 SRR002328.231861 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 168 94 - Glu CTC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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