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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170074567
CDZT01000533
56075
Actinomycetota
TGA
Ser
>WENV170074580
CDZT01000635
175837
Actinomycetota
ACG
Arg
>WENV170074581
CDZT01000635
175837
Actinomycetota
ACG
Arg
>WENV170074702
CDZT01004956
29393
Actinomycetota
GCT
Ser
>WENV170074755
CDZT01006845
191955
Actinomycetota
TGT
Thr
>WENV170074783
CDZT01007857
176075
Actinomycetota
TCT
Arg
>WENV170074869
CDZT01012465
280450
Actinomycetota
TTT
Lys
>WENV170074884
CDZT01012565
99865
Actinomycetota
CAG
Leu
>WENV170074942
CDZT01016365
480376
Actinomycetota
CCC
Gly
>WENV170074984
CDZT01017993
21508
Actinomycetota
GAG
Leu
>WENV170075041
CDZT01019690
117777
Actinomycetota
>WENV170075042
CDZT01019690
175949
Actinomycetota
CAT
Met
>WENV170075046
CDZT01020005
482604
Actinomycetota
TTG
Gln
>WENV170075121
CDZT01022630
280549
Actinomycetota
CAC
Val
>WENV170075129
CDZT01022768
176078
Actinomycetota
GGG
Pro
>WENV170075230
CDZT01026637
175843
Actinomycetota
CAA
Leu
>WENV170075390
CDZT01032746
59689
Actinomycetota
GGA
Ser
>WENV170075397
CDZT01032847
222475
Actinomycetota
CTT
Lys
>WENV170075451
CDZT01034997
175907
Actinomycetota
TAC
Val
>WENV170075480
CDZT01035795
280549
Actinomycetota
CAC
Val
>WENV170075509
CDZT01036919
280549
Actinomycetota
CAC
Val
>WENV170075508
CDZT01036919
418252
Actinomycetota
GAC
Val
>WENV170075506
CDZT01036919
317680
Actinomycetota
CCG
Arg
>WENV170075595
CDZT01040703
176077
Actinomycetota
CAT
Met
>WENV170075654
CDZT01041561
398948
Actinomycetota
TTC
Glu
>WENV170075672
CDZT01042611
175926
Actinomycetota
CAT
Met
>WENV170075721
CDZT01044139
175837
Actinomycetota
ACG
Arg
>WENV170075722
CDZT01044139
175837
Actinomycetota
ACG
Arg
>WENV170075723
CDZT01044139
175837
Actinomycetota
ACG
Arg
>WENV170075724
CDZT01044139
175837
Actinomycetota
ACG
Arg
>WENV170075725
CDZT01044139
175837
Actinomycetota
ACG
Arg
>WENV170075768
CDZT01044815
280524
Actinomycetota
TGC
Ala
>WENV170075767
CDZT01044815
179238
Actinomycetota
GAT
Ile
>WENV170075783
CDZT01045505
29393
Actinomycetota
GCT
Ser
>WENV170075815
CDZT01046747
280703
Actinomycetota
CCT
Arg
>WENV170075874
CDZT01049122
398853
Actinomycetota
CTG
Gln
>WENV170075873
CDZT01049122
289788
Actinomycetota
CTC
Glu
>WENV170075883
CDZT01049657
140768
Actinomycetota
TAG
Leu
>WENV170075884
CDZT01049657
280496
Actinomycetota
CGT
Thr
>WENV170075882
CDZT01049657
323758
Actinomycetota
CGT
Thr
>WENV170075893
CDZT01049758
280702
Actinomycetota
GGC
Ala
>WENV170076081
CDZT01055031
280544
Actinomycetota
GTG
His
>WENV170076082
CDZT01055047
56083
Actinomycetota
CGA
Ser
>WENV170076174
CDZT01058071
175883
Actinomycetota
GAT
Ile
>WENV170076252
CDZT01061417
150272
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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