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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170229456
CEQG01121839
46779
Actinomycetota
GAG
Leu
>WENV170228931
CEQG01054355
181905
Actinomycetota
CAT
Met
>WENV170229628
CEQG01140970
195667
Actinomycetota
GAT
Ile
>WENV170228993
CEQG01061052
202993
Actinomycetota
CAT
Met
>WENV170228961
CEQG01056957
177601
Actinomycetota
CAT
Met
>WENV170228465
CEQG01013249
284834
Actinomycetota
GGC
Ala
>WENV170229512
CEQG01126773
178316
Actinomycetota
CGG
Pro
>WENV170228604
CEQG01023912
486372
Actinomycetota
GCA
Cys
>WENV170229294
CEQG01098976
74688
Actinomycetota
CAG
Leu
>WENV170229151
CEQG01080043
281633
Actinomycetota
CCA
Trp
>WENV170229548
CEQG01131105
150409
Actinomycetota
TTG
Gln
>WENV170228537
CEQG01018448
285876
Actinomycetota
CGT
Thr
>WENV170229001
CEQG01062742
317626
Actinomycetota
GGC
Ala
>WENV170229492
CEQG01124155
313796
Actinomycetota
ACG
Arg
>WENV170229577
CEQG01135243
317597
Actinomycetota
CTT
Lys
>WENV170228474
CEQG01014062
209510
Actinomycetota
GAT
Ile
>WENV170229305
CEQG01101479
219754
Actinomycetota
CAT
Met
>WENV170229040
CEQG01068392
178317
Actinomycetota
CAT
Met
>WENV170228835
CEQG01046197
286927
Actinomycetota
TCT
Arg
>WENV170228450
CEQG01012321
417479
Actinomycetota
CCT
Arg
>WENV170229951
CEQG01249333
118175
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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