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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170253078
CEQU01051154
181905
Actinomycetota
CAT
Met
>WENV170253835
CEQU01153538
398892
Actinomycetota
TGT
Thr
>WENV170253774
CEQU01123469
202993
Actinomycetota
CAT
Met
>WENV170253032
CEQU01046630
177601
Actinomycetota
CAT
Met
>WENV170252380
CEQU01002665
286398
Actinomycetota
GTT
Asn
>WENV170253529
CEQU01095838
176443
Actinomycetota
TCT
Arg
>WENV170254212
CEQU01255440
57288
Actinomycetota
TGA
Ser
>WENV170253644
CEQU01105147
486372
Actinomycetota
GCA
Cys
>WENV170253609
CEQU01103426
100199
Actinomycetota
GTA
Tyr
>WENV170252449
CEQU01008468
30248
Actinomycetota
CGA
Ser
>WENV170253060
CEQU01049795
285876
Actinomycetota
CGT
Thr
>WENV170252809
CEQU01030927
290385
Actinomycetota
CGT
Thr
>WENV170252711
CEQU01025196
286628
Actinomycetota
GTG
His
>WENV170252653
CEQU01022079
286483
Actinomycetota
>WENV170252400
CEQU01005431
75551
Actinomycetota
CAG
Leu
>WENV170253291
CEQU01070476
219754
Actinomycetota
CAT
Met
>WENV170252812
CEQU01030927
56361
Actinomycetota
GGA
Ser
>WENV170253330
CEQU01075761
208452
Actinomycetota
GAT
Ile
>WENV170252895
CEQU01036070
286927
Actinomycetota
TCT
Arg
>WENV170252549
CEQU01014665
417479
Actinomycetota
CCT
Arg
>WENV170252757
CEQU01027717
118175
Actinomycetota
GTA
Tyr
>WENV170252810
CEQU01030927
328866
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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