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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170369767
CETR01031890
177601
Actinomycetota
CAT
Met
>WENV170370400
CETR01098923
177601
Actinomycetota
CAT
Met
>WENV170370894
CETR01181770
182444
Actinomycetota
CGG
Pro
>WENV170370810
CETR01148812
286398
Actinomycetota
GTT
Asn
>WENV170369446
CETR01007446
414769
Actinomycetota
CCT
Arg
>WENV170369748
CETR01030460
57288
Actinomycetota
TGA
Ser
>WENV170370294
CETR01084812
57288
Actinomycetota
TGA
Ser
>WENV170369707
CETR01027541
292656
Actinomycetota
ACG
Arg
>WENV170370976
CETR01210921
20383
Actinomycetota
CGA
Ser
>WENV170370600
CETR01122764
57196
Actinomycetota
GAG
Leu
>WENV170369941
CETR01048721
290385
Actinomycetota
CGT
Thr
>WENV170370070
CETR01061258
317626
Actinomycetota
GGC
Ala
>WENV170369524
CETR01012548
289355
Actinomycetota
CAC
Val
>WENV170370259
CETR01081391
286628
Actinomycetota
GTG
His
>WENV170369413
CETR01004829
75551
Actinomycetota
CAG
Leu
>WENV170370455
CETR01103896
282997
Actinomycetota
TTT
Lys
>WENV170370039
CETR01058449
56361
Actinomycetota
GGA
Ser
>WENV170369460
CETR01008341
198609
Actinomycetota
TGG
Pro
>WENV170369730
CETR01028691
301953
Actinomycetota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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