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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170397125
CEUD01027946
281633
Actinomycetota
CCA
Trp
>WENV170397171
CEUD01031803
198609
Actinomycetota
TGG
Pro
>WENV170397547
CEUD01070930
20383
Actinomycetota
CGA
Ser
>WENV170397724
CEUD01087131
414769
Actinomycetota
CCT
Arg
>WENV170397727
CEUD01087514
302020
Actinomycetota
CCG
Arg
>WENV170397732
CEUD01088092
290588
Actinomycetota
CTT
Lys
>WENV170397873
CEUD01105746
57196
Actinomycetota
GAG
Leu
>WENV170398068
CEUD01119232
283002
Actinomycetota
ACG
Arg
>WENV170398073
CEUD01119868
301953
Actinomycetota
TGT
Thr
>WENV170398081
CEUD01120336
317626
Actinomycetota
GGC
Ala
>WENV170398116
CEUD01122520
219754
Actinomycetota
CAT
Met
>WENV170398143
CEUD01123204
289355
Actinomycetota
CAC
Val
>WENV170398442
CEUD01212879
286398
Actinomycetota
GTT
Asn
>WENV170398483
CEUD01226507
179351
Actinomycetota
CAT
Met
>WENV170398987
CEUD01331811
177601
Actinomycetota
CAT
Met
>WENV170399016
CEUD01333958
57288
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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