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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170528313
CEWJ01034136
283002
Actinomycetota
ACG
Arg
>WENV170529481
CEWJ01135494
177601
Actinomycetota
CAT
Met
>WENV170529430
CEWJ01132216
219754
Actinomycetota
CAT
Met
>WENV170529143
CEWJ01106681
414769
Actinomycetota
CCT
Arg
>WENV170528885
CEWJ01084237
20383
Actinomycetota
CGA
Ser
>WENV170529875
CEWJ01192857
236563
Actinomycetota
CGG
Pro
>WENV170530093
CEWJ01271273
469191
Actinomycetota
CTG
Gln
>WENV170528315
CEWJ01034298
290588
Actinomycetota
CTT
Lys
>WENV170529429
CEWJ01132216
286398
Actinomycetota
GTT
Asn
>WENV170528456
CEWJ01045519
57288
Actinomycetota
TGA
Ser
>WENV170528877
CEWJ01083217
301953
Actinomycetota
TGT
Thr
>WENV170529279
CEWJ01120887
456078
Actinomycetota
TTG
Gln
>WENV170529537
CEWJ01139292
366609
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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