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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170540254
CWGX01000041
176499
Actinomycetota
CAT
Met
>WENV170540216
CWGX01000002
283311
Actinomycetota
CCT
Arg
>WENV170540221
CWGX01000008
295964
Actinomycetota
GTT
Asn
>WENV170540257
CWGX01000041
56384
Actinomycetota
TGA
Ser
>WENV170540226
CWGX01000012
284087
Actinomycetota
CAC
Val
>WENV170540241
CWGX01000035
284087
Actinomycetota
CAC
Val
>WENV170540220
CWGX01000007
176075
Actinomycetota
TCT
Arg
>WENV170540228
CWGX01000012
176078
Actinomycetota
GGG
Pro
>WENV170540218
CWGX01000005
482604
Actinomycetota
TTG
Gln
>WENV170540229
CWGX01000016
175837
Actinomycetota
ACG
Arg
>WENV170540237
CWGX01000031
187349
Actinomycetota
TGG
Pro
>WENV170540256
CWGX01000041
56383
Actinomycetota
CGA
Ser
>WENV170540233
CWGX01000023
140878
Actinomycetota
TAA
Leu
>WENV170540217
CWGX01000004
283312
Actinomycetota
GTG
His
>WENV170540242
CWGX01000036
184564
Actinomycetota
CTT
Lys
>WENV170540249
CWGX01000039
280524
Actinomycetota
TGC
Ala
>WENV170540247
CWGX01000038
283313
Actinomycetota
CCG
Arg
>WENV170540260
CWGX01000053
398948
Actinomycetota
TTC
Glu
>WENV170540253
CWGX01000041
117777
Actinomycetota
>WENV170540219
CWGX01000005
280523
Actinomycetota
GGC
Ala
>WENV170540225
CWGX01000011
20415
Actinomycetota
GAG
Leu
>WENV170540239
CWGX01000035
140879
Actinomycetota
TAG
Leu
>WENV170540255
CWGX01000041
20205
Actinomycetota
GCT
Ser
>WENV170540263
CWGX01000053
178569
Actinomycetota
CAT
Met
>WENV170540251
CWGX01000041
280450
Actinomycetota
TTT
Lys
>WENV170540235
CWGX01000025
480329
Actinomycetota
CCC
Gly
>WENV170540236
CWGX01000025
99865
Actinomycetota
CAG
Leu
>WENV170540246
CWGX01000038
398853
Actinomycetota
CTG
Gln
>WENV170540234
CWGX01000023
175843
Actinomycetota
CAA
Leu
>WENV170540230
CWGX01000016
178568
Actinomycetota
ACG
Arg
>WENV170540245
CWGX01000038
289788
Actinomycetota
CTC
Glu
>WENV170540238
CWGX01000035
280470
Actinomycetota
CGT
Thr
>WENV170540231
CWGX01000018
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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