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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170540404
CWHB01000001
104211
Actinomycetota
CAG
Leu
>WENV170540406
CWHB01000001
280524
Actinomycetota
TGC
Ala
>WENV170540408
CWHB01000007
175837
Actinomycetota
ACG
Arg
>WENV170540409
CWHB01000007
175837
Actinomycetota
ACG
Arg
>WENV170540410
CWHB01000007
147806
Actinomycetota
TAA
Leu
>WENV170540411
CWHB01000007
176642
Actinomycetota
CAA
Leu
>WENV170540412
CWHB01000007
175882
Actinomycetota
TGG
Pro
>WENV170540413
CWHB01000007
280498
Actinomycetota
GTT
Asn
>WENV170540418
CWHB01000010
176723
Actinomycetota
TCT
Arg
>WENV170540421
CWHB01000011
46681
Actinomycetota
CGA
Ser
>WENV170540423
CWHB01000011
280489
Actinomycetota
CTC
Glu
>WENV170540424
CWHB01000011
398853
Actinomycetota
CTG
Gln
>WENV170540425
CWHB01000011
280470
Actinomycetota
CGT
Thr
>WENV170540426
CWHB01000011
140768
Actinomycetota
TAG
Leu
>WENV170540429
CWHB01000011
117903
Actinomycetota
GTA
Tyr
>WENV170540430
CWHB01000011
176499
Actinomycetota
CAT
Met
>WENV170540431
CWHB01000011
56166
Actinomycetota
TGA
Ser
>WENV170540434
CWHB01000011
176555
Actinomycetota
CAT
Met
>WENV170540435
CWHB01000012
280450
Actinomycetota
TTT
Lys
>WENV170540436
CWHB01000017
280523
Actinomycetota
GGC
Ala
>WENV170540437
CWHB01000023
280498
Actinomycetota
GTT
Asn
>WENV170540441
CWHB01000024
317680
Actinomycetota
CCG
Arg
>WENV170540443
CWHB01000026
176638
Actinomycetota
GGG
Pro
>WENV170540444
CWHB01000026
480319
Actinomycetota
TTG
Gln
>WENV170540448
CWHB01000027
280499
Actinomycetota
CCT
Arg
>WENV170540449
CWHB01000028
179231
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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