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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170540515
CWHD01000058
117777
Actinomycetota
>WENV170540532
CWHD01000073
175837
Actinomycetota
ACG
Arg
>WENV170540531
CWHD01000073
175843
Actinomycetota
CAA
Leu
>WENV170540523
CWHD01000066
280549
Actinomycetota
CAC
Val
>WENV170540540
CWHD01000081
280549
Actinomycetota
CAC
Val
>WENV170540511
CWHD01000034
99865
Actinomycetota
CAG
Leu
>WENV170540545
CWHD01000082
176077
Actinomycetota
CAT
Met
>WENV170540516
CWHD01000058
175949
Actinomycetota
CAT
Met
>WENV170540510
CWHD01000028
480376
Actinomycetota
CCC
Gly
>WENV170540520
CWHD01000066
358727
Actinomycetota
CCG
Arg
>WENV170540546
CWHD01000082
280703
Actinomycetota
CCT
Arg
>WENV170540518
CWHD01000058
56083
Actinomycetota
CGA
Ser
>WENV170540535
CWHD01000073
280496
Actinomycetota
CGT
Thr
>WENV170540533
CWHD01000073
323758
Actinomycetota
CGT
Thr
>WENV170540502
CWHD01000005
349164
Actinomycetota
CTC
Glu
>WENV170540503
CWHD01000005
430848
Actinomycetota
CTG
Gln
>WENV170540505
CWHD01000005
222475
Actinomycetota
CTT
Lys
>WENV170540522
CWHD01000066
434162
Actinomycetota
GAC
Val
>WENV170540525
CWHD01000073
21508
Actinomycetota
GAG
Leu
>WENV170540513
CWHD01000046
179238
Actinomycetota
GAT
Ile
>WENV170540517
CWHD01000058
29393
Actinomycetota
GCT
Ser
>WENV170540506
CWHD01000005
59689
Actinomycetota
GGA
Ser
>WENV170540527
CWHD01000073
280702
Actinomycetota
GGC
Ala
>WENV170540528
CWHD01000073
280702
Actinomycetota
GGC
Ala
>WENV170540509
CWHD01000025
176078
Actinomycetota
GGG
Pro
>WENV170540507
CWHD01000008
280544
Actinomycetota
GTG
His
>WENV170540524
CWHD01000071
280498
Actinomycetota
GTT
Asn
>WENV170540542
CWHD01000081
280498
Actinomycetota
GTT
Asn
>WENV170540530
CWHD01000073
150272
Actinomycetota
TAA
Leu
>WENV170540512
CWHD01000035
175907
Actinomycetota
TAC
Val
>WENV170540534
CWHD01000073
140768
Actinomycetota
TAG
Leu
>WENV170540508
CWHD01000009
176075
Actinomycetota
TCT
Arg
>WENV170540537
CWHD01000080
56075
Actinomycetota
TGA
Ser
>WENV170540529
CWHD01000073
184157
Actinomycetota
TGG
Pro
>WENV170540514
CWHD01000047
191955
Actinomycetota
TGT
Thr
>WENV170540547
CWHD01000082
398948
Actinomycetota
TTC
Glu
>WENV170540526
CWHD01000073
506175
Actinomycetota
TTG
Gln
>WENV170540504
CWHD01000005
280450
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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