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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170540960
CXPH01000006
176640
Actinomycetota
TAC
Val
>WENV170540961
CXPH01000008
20450
Actinomycetota
GAG
Leu
>WENV170540962
CXPH01000009
222475
Actinomycetota
CTT
Lys
>WENV170540963
CXPH01000012
176075
Actinomycetota
TCT
Arg
>WENV170540966
CXPH01000014
418252
Actinomycetota
GAC
Val
>WENV170540967
CXPH01000014
280549
Actinomycetota
CAC
Val
>WENV170540969
CXPH01000015
175837
Actinomycetota
ACG
Arg
>WENV170540970
CXPH01000015
175837
Actinomycetota
ACG
Arg
>WENV170540971
CXPH01000018
280544
Actinomycetota
GTG
His
>WENV170540972
CXPH01000019
179238
Actinomycetota
GAT
Ile
>WENV170540973
CXPH01000019
280524
Actinomycetota
TGC
Ala
>WENV170540974
CXPH01000020
147829
Actinomycetota
TAA
Leu
>WENV170540975
CXPH01000021
280702
Actinomycetota
GGC
Ala
>WENV170540976
CXPH01000021
280702
Actinomycetota
GGC
Ala
>WENV170540977
CXPH01000024
280703
Actinomycetota
CCT
Arg
>WENV170540978
CXPH01000026
280498
Actinomycetota
GTT
Asn
>WENV170540979
CXPH01000026
280498
Actinomycetota
GTT
Asn
>WENV170540980
CXPH01000030
176078
Actinomycetota
GGG
Pro
>WENV170540981
CXPH01000031
191955
Actinomycetota
TGT
Thr
>WENV170540982
CXPH01000036
60767
Actinomycetota
TGA
Ser
>WENV170540983
CXPH01000037
56451
Actinomycetota
CGA
Ser
>WENV170540985
CXPH01000048
398948
Actinomycetota
TTC
Glu
>WENV170540986
CXPH01000082
175843
Actinomycetota
CAA
Leu
>WENV170540987
CXPH01000082
175848
Actinomycetota
TGG
Pro
>WENV170540989
CXPH01000085
317680
Actinomycetota
CCG
Arg
>WENV170540991
CXPH01000090
117777
Actinomycetota
>WENV170540992
CXPH01000090
175949
Actinomycetota
CAT
Met
>WENV170540993
CXPH01000090
29393
Actinomycetota
GCT
Ser
>WENV170540995
CXPH01000097
482604
Actinomycetota
TTG
Gln
>WENV170540996
CXPH01000109
481233
Actinomycetota
CCC
Gly
>WENV170540997
CXPH01000109
99865
Actinomycetota
CAG
Leu
>WENV170540998
CXPH01000120
280450
Actinomycetota
TTT
Lys
>WENV170540999
CXPH01000130
176077
Actinomycetota
CAT
Met
>WENV170541001
CXPH01000151
418252
Actinomycetota
GAC
Val
>WENV170541002
CXPH01000151
280549
Actinomycetota
CAC
Val
>WENV170541003
CXPH01000156
59689
Actinomycetota
GGA
Ser
>WENV170541004
CXPH01000156
289788
Actinomycetota
CTC
Glu
>WENV170541005
CXPH01000156
430848
Actinomycetota
CTG
Gln
>WENV170541011
CXPH01000184
179238
Actinomycetota
GAT
Ile
>WENV170541012
CXPH01000184
280524
Actinomycetota
TGC
Ala
>WENV170541013
CXPH01000225
323758
Actinomycetota
CGT
Thr
>WENV170541014
CXPH01000225
140768
Actinomycetota
TAG
Leu
>WENV170541015
CXPH01000463
176077
Actinomycetota
CAT
Met
>WENV170541016
CXPH01000543
398948
Actinomycetota
TTC
Glu
>WENV170541017
CXPH01000832
175837
Actinomycetota
ACG
Arg
>WENV170541018
CXPH01000832
175837
Actinomycetota
ACG
Arg
>WENV170541019
CXPH01000856
280450
Actinomycetota
TTT
Lys
>WENV170541020
CXPH01001033
289788
Actinomycetota
CTC
Glu
>WENV170541021
CXPH01001058
222475
Actinomycetota
CTT
Lys
>WENV170541023
CXPH01001668
280498
Actinomycetota
GTT
Asn
>WENV170541025
CXPH01001821
280702
Actinomycetota
GGC
Ala
>WENV170541026
CXPH01002079
482604
Actinomycetota
TTG
Gln
>WENV170541027
CXPH01002190
481233
Actinomycetota
CCC
Gly
>WENV170541028
CXPH01002248
29393
Actinomycetota
GCT
Ser
>WENV170541029
CXPH01002293
295964
Actinomycetota
GTT
Asn
>WENV170541030
CXPH01003079
481233
Actinomycetota
CCC
Gly
>WENV170541031
CXPH01003217
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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