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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547131
CXTH01000001
482604
Actinomycetota
TTG
Gln
>WENV170547132
CXTH01000001
175848
Actinomycetota
TGG
Pro
>WENV170547133
CXTH01000001
147829
Actinomycetota
TAA
Leu
>WENV170547134
CXTH01000001
175843
Actinomycetota
CAA
Leu
>WENV170547135
CXTH01000001
280702
Actinomycetota
GGC
Ala
>WENV170547136
CXTH01000001
175837
Actinomycetota
ACG
Arg
>WENV170547137
CXTH01000003
280544
Actinomycetota
GTG
His
>WENV170547138
CXTH01000003
227544
Actinomycetota
TAC
Val
>WENV170547139
CXTH01000004
398948
Actinomycetota
TTC
Glu
>WENV170547142
CXTH01000004
176077
Actinomycetota
CAT
Met
>WENV170547143
CXTH01000004
280703
Actinomycetota
CCT
Arg
>WENV170547145
CXTH01000006
323758
Actinomycetota
CGT
Thr
>WENV170547146
CXTH01000006
140768
Actinomycetota
TAG
Leu
>WENV170547147
CXTH01000007
349164
Actinomycetota
CTC
Glu
>WENV170547148
CXTH01000007
430848
Actinomycetota
CTG
Gln
>WENV170547149
CXTH01000007
280450
Actinomycetota
TTT
Lys
>WENV170547150
CXTH01000007
222475
Actinomycetota
CTT
Lys
>WENV170547151
CXTH01000007
59689
Actinomycetota
GGA
Ser
>WENV170547154
CXTH01000008
434162
Actinomycetota
GAC
Val
>WENV170547155
CXTH01000008
280549
Actinomycetota
CAC
Val
>WENV170547157
CXTH01000008
176078
Actinomycetota
GGG
Pro
>WENV170547159
CXTH01000012
56451
Actinomycetota
CGA
Ser
>WENV170547160
CXTH01000012
60767
Actinomycetota
TGA
Ser
>WENV170547161
CXTH01000013
176075
Actinomycetota
TCT
Arg
>WENV170547162
CXTH01000015
349003
Actinomycetota
CCG
Arg
>WENV170547164
CXTH01000016
179238
Actinomycetota
GAT
Ile
>WENV170547165
CXTH01000016
280524
Actinomycetota
TGC
Ala
>WENV170547167
CXTH01000017
434162
Actinomycetota
GAC
Val
>WENV170547168
CXTH01000017
280549
Actinomycetota
CAC
Val
>WENV170547169
CXTH01000017
117777
Actinomycetota
>WENV170547170
CXTH01000017
175949
Actinomycetota
CAT
Met
>WENV170547171
CXTH01000017
29393
Actinomycetota
GCT
Ser
>WENV170547173
CXTH01000026
280498
Actinomycetota
GTT
Asn
>WENV170547174
CXTH01000026
280498
Actinomycetota
GTT
Asn
>WENV170547175
CXTH01000031
191955
Actinomycetota
TGT
Thr
>WENV170547176
CXTH01000032
99865
Actinomycetota
CAG
Leu
>WENV170547177
CXTH01000032
481233
Actinomycetota
CCC
Gly
>WENV170547178
CXTH01000034
20450
Actinomycetota
GAG
Leu
>WENV170547179
CXTH01000054
280702
Actinomycetota
GGC
Ala
>WENV170547180
CXTH01000054
280702
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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