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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547193
CXTI01000021
481233
Actinomycetota
CCC
Gly
>WENV170547212
CXTI01000048
147829
Actinomycetota
TAA
Leu
>WENV170547205
CXTI01000037
280498
Actinomycetota
GTT
Asn
>WENV170547198
CXTI01000027
140768
Actinomycetota
TAG
Leu
>WENV170547185
CXTI01000008
176075
Actinomycetota
TCT
Arg
>WENV170547217
CXTI01000067
175848
Actinomycetota
TGG
Pro
>WENV170547226
CXTI01000091
176078
Actinomycetota
GGG
Pro
>WENV170547199
CXTI01000030
59689
Actinomycetota
GGA
Ser
>WENV170547218
CXTI01000071
175837
Actinomycetota
ACG
Arg
>WENV170547211
CXTI01000046
29393
Actinomycetota
GCT
Ser
>WENV170547208
CXTI01000046
280549
Actinomycetota
CAC
Val
>WENV170547222
CXTI01000073
280549
Actinomycetota
CAC
Val
>WENV170547200
CXTI01000030
349164
Actinomycetota
CTC
Glu
>WENV170547195
CXTI01000024
20450
Actinomycetota
GAG
Leu
>WENV170547206
CXTI01000045
280702
Actinomycetota
GGC
Ala
>WENV170547207
CXTI01000045
280702
Actinomycetota
GGC
Ala
>WENV170547221
CXTI01000073
434162
Actinomycetota
GAC
Val
>WENV170547228
CXTI01000131
434162
Actinomycetota
GAC
Val
>WENV170547192
CXTI01000014
176077
Actinomycetota
CAT
Met
>WENV170547184
CXTI01000005
280524
Actinomycetota
TGC
Ala
>WENV170547224
CXTI01000074
398948
Actinomycetota
TTC
Glu
>WENV170547209
CXTI01000046
117777
Actinomycetota
>WENV170547210
CXTI01000046
175949
Actinomycetota
CAT
Met
>WENV170547182
CXTI01000004
227544
Actinomycetota
TAC
Val
>WENV170547202
CXTI01000031
191955
Actinomycetota
TGT
Thr
>WENV170547214
CXTI01000059
280544
Actinomycetota
GTG
His
>WENV170547181
CXTI01000001
280703
Actinomycetota
CCT
Arg
>WENV170547203
CXTI01000036
280450
Actinomycetota
TTT
Lys
>WENV170547197
CXTI01000027
323758
Actinomycetota
CGT
Thr
>WENV170547189
CXTI01000011
358727
Actinomycetota
CCG
Arg
>WENV170547186
CXTI01000009
56451
Actinomycetota
CGA
Ser
>WENV170547194
CXTI01000021
99865
Actinomycetota
CAG
Leu
>WENV170547204
CXTI01000036
222475
Actinomycetota
CTT
Lys
>WENV170547215
CXTI01000065
175843
Actinomycetota
CAA
Leu
>WENV170547201
CXTI01000030
430848
Actinomycetota
CTG
Gln
>WENV170547183
CXTI01000005
179238
Actinomycetota
GAT
Ile
>WENV170547187
CXTI01000009
60767
Actinomycetota
TGA
Ser
>WENV170547216
CXTI01000067
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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