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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547231
CXTJ01000001
434162
Actinomycetota
GAC
Val
>WENV170547232
CXTJ01000001
280549
Actinomycetota
CAC
Val
>WENV170547234
CXTJ01000001
176078
Actinomycetota
GGG
Pro
>WENV170547235
CXTJ01000002
179238
Actinomycetota
GAT
Ile
>WENV170547236
CXTJ01000002
280524
Actinomycetota
TGC
Ala
>WENV170547238
CXTJ01000006
295964
Actinomycetota
GTT
Asn
>WENV170547239
CXTJ01000006
280498
Actinomycetota
GTT
Asn
>WENV170547240
CXTJ01000008
56451
Actinomycetota
CGA
Ser
>WENV170547242
CXTJ01000009
176077
Actinomycetota
CAT
Met
>WENV170547243
CXTJ01000009
280703
Actinomycetota
CCT
Arg
>WENV170547244
CXTJ01000010
280450
Actinomycetota
TTT
Lys
>WENV170547245
CXTJ01000010
222475
Actinomycetota
CTT
Lys
>WENV170547246
CXTJ01000013
117777
Actinomycetota
>WENV170547247
CXTJ01000013
175949
Actinomycetota
CAT
Met
>WENV170547248
CXTJ01000013
29393
Actinomycetota
GCT
Ser
>WENV170547249
CXTJ01000014
60767
Actinomycetota
TGA
Ser
>WENV170547251
CXTJ01000016
289788
Actinomycetota
CTC
Glu
>WENV170547252
CXTJ01000016
430848
Actinomycetota
CTG
Gln
>WENV170547253
CXTJ01000016
59689
Actinomycetota
GGA
Ser
>WENV170547254
CXTJ01000018
280544
Actinomycetota
GTG
His
>WENV170547255
CXTJ01000020
280702
Actinomycetota
GGC
Ala
>WENV170547256
CXTJ01000020
280702
Actinomycetota
GGC
Ala
>WENV170547257
CXTJ01000020
175837
Actinomycetota
ACG
Arg
>WENV170547258
CXTJ01000020
175837
Actinomycetota
ACG
Arg
>WENV170547259
CXTJ01000025
175843
Actinomycetota
CAA
Leu
>WENV170547260
CXTJ01000025
482604
Actinomycetota
TTG
Gln
>WENV170547261
CXTJ01000025
175848
Actinomycetota
TGG
Pro
>WENV170547262
CXTJ01000029
317680
Actinomycetota
CCG
Arg
>WENV170547265
CXTJ01000031
191955
Actinomycetota
TGT
Thr
>WENV170547266
CXTJ01000034
481233
Actinomycetota
CCC
Gly
>WENV170547267
CXTJ01000034
99865
Actinomycetota
CAG
Leu
>WENV170547268
CXTJ01000039
147829
Actinomycetota
TAA
Leu
>WENV170547269
CXTJ01000042
176075
Actinomycetota
TCT
Arg
>WENV170547270
CXTJ01000045
227544
Actinomycetota
TAC
Val
>WENV170547271
CXTJ01000051
323758
Actinomycetota
CGT
Thr
>WENV170547272
CXTJ01000051
140768
Actinomycetota
TAG
Leu
>WENV170547273
CXTJ01000060
398948
Actinomycetota
TTC
Glu
>WENV170547276
CXTJ01000074
434162
Actinomycetota
GAC
Val
>WENV170547277
CXTJ01000074
280549
Actinomycetota
CAC
Val
>WENV170547278
CXTJ01000082
20450
Actinomycetota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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