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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547316
CXTK01000064
481233
Actinomycetota
CCC
Gly
>WENV170547306
CXTK01000044
147829
Actinomycetota
TAA
Leu
>WENV170547304
CXTK01000035
280498
Actinomycetota
GTT
Asn
>WENV170547303
CXTK01000035
295964
Actinomycetota
GTT
Asn
>WENV170547294
CXTK01000020
140768
Actinomycetota
TAG
Leu
>WENV170547320
CXTK01000070
176075
Actinomycetota
TCT
Arg
>WENV170547302
CXTK01000027
175848
Actinomycetota
TGG
Pro
>WENV170547292
CXTK01000013
176078
Actinomycetota
GGG
Pro
>WENV170547301
CXTK01000027
482604
Actinomycetota
TTG
Gln
>WENV170547283
CXTK01000007
59689
Actinomycetota
GGA
Ser
>WENV170547321
CXTK01000074
175837
Actinomycetota
ACG
Arg
>WENV170547330
CXTK01000157
175837
Actinomycetota
ACG
Arg
>WENV170547331
CXTK01000157
175837
Actinomycetota
ACG
Arg
>WENV170547309
CXTK01000048
29393
Actinomycetota
GCT
Ser
>WENV170547314
CXTK01000062
280549
Actinomycetota
CAC
Val
>WENV170547326
CXTK01000083
280549
Actinomycetota
CAC
Val
>WENV170547310
CXTK01000049
20450
Actinomycetota
GAG
Leu
>WENV170547322
CXTK01000078
280702
Actinomycetota
GGC
Ala
>WENV170547323
CXTK01000078
280702
Actinomycetota
GGC
Ala
>WENV170547299
CXTK01000023
176077
Actinomycetota
CAT
Met
>WENV170547285
CXTK01000007
418858
Actinomycetota
CTG
Gln
>WENV170547329
CXTK01000106
418858
Actinomycetota
CTG
Gln
>WENV170547319
CXTK01000066
280524
Actinomycetota
TGC
Ala
>WENV170547296
CXTK01000023
398948
Actinomycetota
TTC
Glu
>WENV170547307
CXTK01000048
117777
Actinomycetota
>WENV170547308
CXTK01000048
175949
Actinomycetota
CAT
Met
>WENV170547313
CXTK01000062
418252
Actinomycetota
GAC
Val
>WENV170547325
CXTK01000083
418252
Actinomycetota
GAC
Val
>WENV170547295
CXTK01000021
191955
Actinomycetota
TGT
Thr
>WENV170547327
CXTK01000085
280544
Actinomycetota
GTG
His
>WENV170547305
CXTK01000037
280703
Actinomycetota
CCT
Arg
>WENV170547286
CXTK01000007
280450
Actinomycetota
TTT
Lys
>WENV170547293
CXTK01000020
323758
Actinomycetota
CGT
Thr
>WENV170547280
CXTK01000001
56451
Actinomycetota
CGA
Ser
>WENV170547300
CXTK01000027
175843
Actinomycetota
CAA
Leu
>WENV170547291
CXTK01000010
317680
Actinomycetota
CCG
Arg
>WENV170547284
CXTK01000007
289788
Actinomycetota
CTC
Glu
>WENV170547328
CXTK01000106
289788
Actinomycetota
CTC
Glu
>WENV170547318
CXTK01000066
179238
Actinomycetota
GAT
Ile
>WENV170547281
CXTK01000001
60767
Actinomycetota
TGA
Ser
>WENV170547287
CXTK01000007
200276
Actinomycetota
CTT
Lys
>WENV170547289
CXTK01000009
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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