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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547395
CXTM01000011
481233
Actinomycetota
CCC
Gly
>WENV170547383
CXTM01000001
147829
Actinomycetota
TAA
Leu
>WENV170547427
CXTM01000123
280498
Actinomycetota
GTT
Asn
>WENV170547426
CXTM01000121
295964
Actinomycetota
GTT
Asn
>WENV170547407
CXTM01000047
140768
Actinomycetota
TAG
Leu
>WENV170547417
CXTM01000085
176075
Actinomycetota
TCT
Arg
>WENV170547382
CXTM01000001
175848
Actinomycetota
TGG
Pro
>WENV170547408
CXTM01000053
176078
Actinomycetota
GGG
Pro
>WENV170547409
CXTM01000059
482604
Actinomycetota
TTG
Gln
>WENV170547428
CXTM01000133
59689
Actinomycetota
GGA
Ser
>WENV170547414
CXTM01000063
175837
Actinomycetota
ACG
Arg
>WENV170547415
CXTM01000063
175837
Actinomycetota
ACG
Arg
>WENV170547392
CXTM01000008
29393
Actinomycetota
GCT
Ser
>WENV170547420
CXTM01000096
280549
Actinomycetota
CAC
Val
>WENV170547424
CXTM01000099
280549
Actinomycetota
CAC
Val
>WENV170547429
CXTM01000133
349164
Actinomycetota
CTC
Glu
>WENV170547397
CXTM01000013
20450
Actinomycetota
GAG
Leu
>WENV170547410
CXTM01000059
280702
Actinomycetota
GGC
Ala
>WENV170547411
CXTM01000059
280702
Actinomycetota
GGC
Ala
>WENV170547419
CXTM01000096
434162
Actinomycetota
GAC
Val
>WENV170547423
CXTM01000099
434162
Actinomycetota
GAC
Val
>WENV170547399
CXTM01000014
176077
Actinomycetota
CAT
Met
>WENV170547404
CXTM01000032
280524
Actinomycetota
TGC
Ala
>WENV170547400
CXTM01000023
398948
Actinomycetota
TTC
Glu
>WENV170547390
CXTM01000008
117777
Actinomycetota
>WENV170547391
CXTM01000008
175949
Actinomycetota
CAT
Met
>WENV170547389
CXTM01000007
227544
Actinomycetota
TAC
Val
>WENV170547405
CXTM01000038
191955
Actinomycetota
TGT
Thr
>WENV170547412
CXTM01000061
280544
Actinomycetota
GTG
His
>WENV170547413
CXTM01000062
280703
Actinomycetota
CCT
Arg
>WENV170547393
CXTM01000009
280450
Actinomycetota
TTT
Lys
>WENV170547406
CXTM01000047
323758
Actinomycetota
CGT
Thr
>WENV170547386
CXTM01000006
358727
Actinomycetota
CCG
Arg
>WENV170547402
CXTM01000027
56451
Actinomycetota
CGA
Ser
>WENV170547396
CXTM01000011
99865
Actinomycetota
CAG
Leu
>WENV170547394
CXTM01000009
222475
Actinomycetota
CTT
Lys
>WENV170547384
CXTM01000001
175843
Actinomycetota
CAA
Leu
>WENV170547430
CXTM01000133
430848
Actinomycetota
CTG
Gln
>WENV170547403
CXTM01000032
179238
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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