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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549073
CXUV01000001
147829
Actinomycetota
TAA
Leu
>WENV170549072
CXUV01000001
176078
Actinomycetota
GGG
Pro
>WENV170549070
CXUV01000001
280549
Actinomycetota
CAC
Val
>WENV170549069
CXUV01000001
434162
Actinomycetota
GAC
Val
>WENV170549074
CXUV01000003
20450
Actinomycetota
GAG
Leu
>WENV170549075
CXUV01000004
191955
Actinomycetota
TGT
Thr
>WENV170549076
CXUV01000005
59689
Actinomycetota
GGA
Ser
>WENV170549077
CXUV01000005
349164
Actinomycetota
CTC
Glu
>WENV170549078
CXUV01000005
430848
Actinomycetota
CTG
Gln
>WENV170549080
CXUV01000006
280450
Actinomycetota
TTT
Lys
>WENV170549082
CXUV01000006
358727
Actinomycetota
CCG
Arg
>WENV170549081
CXUV01000006
222475
Actinomycetota
CTT
Lys
>WENV170549084
CXUV01000007
175848
Actinomycetota
TGG
Pro
>WENV170549086
CXUV01000007
280702
Actinomycetota
GGC
Ala
>WENV170549087
CXUV01000007
280702
Actinomycetota
GGC
Ala
>WENV170549085
CXUV01000007
175843
Actinomycetota
CAA
Leu
>WENV170549083
CXUV01000007
506175
Actinomycetota
TTG
Gln
>WENV170549089
CXUV01000010
280498
Actinomycetota
GTT
Asn
>WENV170549090
CXUV01000011
176075
Actinomycetota
TCT
Arg
>WENV170549092
CXUV01000013
398948
Actinomycetota
TTC
Glu
>WENV170549093
CXUV01000015
56451
Actinomycetota
CGA
Ser
>WENV170549094
CXUV01000015
60767
Actinomycetota
TGA
Ser
>WENV170549096
CXUV01000016
175837
Actinomycetota
ACG
Arg
>WENV170549098
CXUV01000017
176077
Actinomycetota
CAT
Met
>WENV170549099
CXUV01000017
280703
Actinomycetota
CCT
Arg
>WENV170549102
CXUV01000023
29393
Actinomycetota
GCT
Ser
>WENV170549100
CXUV01000023
117777
Actinomycetota
>WENV170549101
CXUV01000023
175949
Actinomycetota
CAT
Met
>WENV170549103
CXUV01000029
227544
Actinomycetota
TAC
Val
>WENV170549104
CXUV01000036
280544
Actinomycetota
GTG
His
>WENV170549105
CXUV01000037
280544
Actinomycetota
GTG
His
>WENV170549107
CXUV01000045
140768
Actinomycetota
TAG
Leu
>WENV170549106
CXUV01000045
323758
Actinomycetota
CGT
Thr
>WENV170549109
CXUV01000049
280549
Actinomycetota
CAC
Val
>WENV170549111
CXUV01000057
481233
Actinomycetota
CCC
Gly
>WENV170549110
CXUV01000057
99865
Actinomycetota
CAG
Leu
>WENV170549113
CXUV01000069
280524
Actinomycetota
TGC
Ala
>WENV170549112
CXUV01000069
179238
Actinomycetota
GAT
Ile
>WENV170549115
CXUV01000078
434162
Actinomycetota
GAC
Val
>WENV170549116
CXUV01000228
280498
Actinomycetota
GTT
Asn
>WENV170549117
CXUV01000228
280498
Actinomycetota
GTT
Asn
>WENV170549118
CXUV01000261
175837
Actinomycetota
ACG
Arg
>WENV170549119
CXUV01000261
175837
Actinomycetota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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