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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549121
CXUW01000004
147829
Actinomycetota
TAA
Leu
>WENV170549124
CXUW01000004
175848
Actinomycetota
TGG
Pro
>WENV170549123
CXUW01000004
482604
Actinomycetota
TTG
Gln
>WENV170549122
CXUW01000004
175843
Actinomycetota
CAA
Leu
>WENV170549126
CXUW01000005
280544
Actinomycetota
GTG
His
>WENV170549125
CXUW01000005
176640
Actinomycetota
TAC
Val
>WENV170549127
CXUW01000006
56451
Actinomycetota
CGA
Ser
>WENV170549128
CXUW01000006
58099
Actinomycetota
TGA
Ser
>WENV170549131
CXUW01000010
140768
Actinomycetota
TAG
Leu
>WENV170549133
CXUW01000010
280441
Actinomycetota
CCG
Arg
>WENV170549130
CXUW01000010
280470
Actinomycetota
CGT
Thr
>WENV170549135
CXUW01000012
191955
Actinomycetota
TGT
Thr
>WENV170549141
CXUW01000014
176078
Actinomycetota
GGG
Pro
>WENV170549139
CXUW01000014
280549
Actinomycetota
CAC
Val
>WENV170549143
CXUW01000015
184564
Actinomycetota
CTT
Lys
>WENV170549142
CXUW01000015
280450
Actinomycetota
TTT
Lys
>WENV170549144
CXUW01000017
280498
Actinomycetota
GTT
Asn
>WENV170549145
CXUW01000017
280498
Actinomycetota
GTT
Asn
>WENV170549148
CXUW01000020
176077
Actinomycetota
CAT
Met
>WENV170549149
CXUW01000020
280703
Actinomycetota
CCT
Arg
>WENV170549150
CXUW01000021
280702
Actinomycetota
GGC
Ala
>WENV170549151
CXUW01000021
280702
Actinomycetota
GGC
Ala
>WENV170549152
CXUW01000024
20450
Actinomycetota
GAG
Leu
>WENV170549155
CXUW01000029
280549
Actinomycetota
CAC
Val
>WENV170549156
CXUW01000030
117777
Actinomycetota
>WENV170549157
CXUW01000030
175949
Actinomycetota
CAT
Met
>WENV170549158
CXUW01000031
175837
Actinomycetota
ACG
Arg
>WENV170549159
CXUW01000031
175837
Actinomycetota
ACG
Arg
>WENV170549160
CXUW01000034
481233
Actinomycetota
CCC
Gly
>WENV170549161
CXUW01000034
99865
Actinomycetota
CAG
Leu
>WENV170549162
CXUW01000035
29393
Actinomycetota
GCT
Ser
>WENV170549163
CXUW01000037
176075
Actinomycetota
TCT
Arg
>WENV170549165
CXUW01000042
280524
Actinomycetota
TGC
Ala
>WENV170549164
CXUW01000042
179238
Actinomycetota
GAT
Ile
>WENV170549166
CXUW01000045
398948
Actinomycetota
TTC
Glu
>WENV170549169
CXUW01000053
398853
Actinomycetota
CTG
Gln
>WENV170549168
CXUW01000053
289788
Actinomycetota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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