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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549172
CXUX01000004
147829
Actinomycetota
TAA
Leu
>WENV170549171
CXUX01000004
227544
Actinomycetota
TAC
Val
>WENV170549173
CXUX01000004
175843
Actinomycetota
CAA
Leu
>WENV170549175
CXUX01000007
59689
Actinomycetota
GGA
Ser
>WENV170549178
CXUX01000007
280450
Actinomycetota
TTT
Lys
>WENV170549179
CXUX01000007
222475
Actinomycetota
CTT
Lys
>WENV170549177
CXUX01000007
430848
Actinomycetota
CTG
Gln
>WENV170549176
CXUX01000007
289788
Actinomycetota
CTC
Glu
>WENV170549180
CXUX01000008
56451
Actinomycetota
CGA
Ser
>WENV170549181
CXUX01000008
60767
Actinomycetota
TGA
Ser
>WENV170549186
CXUX01000010
29393
Actinomycetota
GCT
Ser
>WENV170549183
CXUX01000010
280549
Actinomycetota
CAC
Val
>WENV170549182
CXUX01000010
434162
Actinomycetota
GAC
Val
>WENV170549184
CXUX01000010
117777
Actinomycetota
>WENV170549185
CXUX01000010
175949
Actinomycetota
CAT
Met
>WENV170549187
CXUX01000011
280544
Actinomycetota
GTG
His
>WENV170549189
CXUX01000025
398948
Actinomycetota
TTC
Glu
>WENV170549191
CXUX01000027
481233
Actinomycetota
CCC
Gly
>WENV170549192
CXUX01000027
99865
Actinomycetota
CAG
Leu
>WENV170549193
CXUX01000028
317680
Actinomycetota
CCG
Arg
>WENV170549195
CXUX01000029
280703
Actinomycetota
CCT
Arg
>WENV170549196
CXUX01000030
20450
Actinomycetota
GAG
Leu
>WENV170549197
CXUX01000031
280498
Actinomycetota
GTT
Asn
>WENV170549198
CXUX01000037
176075
Actinomycetota
TCT
Arg
>WENV170549200
CXUX01000045
280498
Actinomycetota
GTT
Asn
>WENV170549199
CXUX01000045
295964
Actinomycetota
GTT
Asn
>WENV170549204
CXUX01000047
176078
Actinomycetota
GGG
Pro
>WENV170549202
CXUX01000047
280549
Actinomycetota
CAC
Val
>WENV170549201
CXUX01000047
434162
Actinomycetota
GAC
Val
>WENV170549206
CXUX01000052
176077
Actinomycetota
CAT
Met
>WENV170549209
CXUX01000057
140768
Actinomycetota
TAG
Leu
>WENV170549208
CXUX01000057
323758
Actinomycetota
CGT
Thr
>WENV170549211
CXUX01000058
175848
Actinomycetota
TGG
Pro
>WENV170549210
CXUX01000058
482604
Actinomycetota
TTG
Gln
>WENV170549213
CXUX01000075
280524
Actinomycetota
TGC
Ala
>WENV170549212
CXUX01000075
179238
Actinomycetota
GAT
Ile
>WENV170549214
CXUX01000079
191955
Actinomycetota
TGT
Thr
>WENV170549217
CXUX01000086
175837
Actinomycetota
ACG
Arg
>WENV170549218
CXUX01000086
175837
Actinomycetota
ACG
Arg
>WENV170549215
CXUX01000086
280702
Actinomycetota
GGC
Ala
>WENV170549216
CXUX01000086
280702
Actinomycetota
GGC
Ala
>WENV170549222
CXUX01000159
434162
Actinomycetota
GAC
Val
>WENV170549226
CXUX01000341
434162
Actinomycetota
GAC
Val
>WENV170549227
CXUX01000368
175837
Actinomycetota
ACG
Arg
>WENV170549228
CXUX01000368
175837
Actinomycetota
ACG
Arg
>WENV170549229
CXUX01000369
280498
Actinomycetota
GTT
Asn
>WENV170549231
CXUX01000377
434162
Actinomycetota
GAC
Val
>WENV170549232
CXUX01000421
175843
Actinomycetota
CAA
Leu
>WENV170549233
CXUX01000424
295964
Actinomycetota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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