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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549335
CXVA01000001
280544
Actinomycetota
GTG
His
>WENV170549336
CXVA01000009
56451
Actinomycetota
CGA
Ser
>WENV170549337
CXVA01000036
398948
Actinomycetota
TTC
Glu
>WENV170549340
CXVA01000040
140768
Actinomycetota
TAG
Leu
>WENV170549339
CXVA01000040
323758
Actinomycetota
CGT
Thr
>WENV170549343
CXVA01000080
99865
Actinomycetota
CAG
Leu
>WENV170549344
CXVA01000084
29393
Actinomycetota
GCT
Ser
>WENV170549345
CXVA01000116
175837
Actinomycetota
ACG
Arg
>WENV170549346
CXVA01000126
506175
Actinomycetota
TTG
Gln
>WENV170549347
CXVA01000129
280450
Actinomycetota
TTT
Lys
>WENV170549348
CXVA01000139
117777
Actinomycetota
>WENV170549349
CXVA01000139
175949
Actinomycetota
CAT
Met
>WENV170549350
CXVA01000154
175843
Actinomycetota
CAA
Leu
>WENV170549351
CXVA01000171
59689
Actinomycetota
GGA
Ser
>WENV170549353
CXVA01000185
349164
Actinomycetota
CTC
Glu
>WENV170549354
CXVA01000185
430848
Actinomycetota
CTG
Gln
>WENV170549355
CXVA01000191
20450
Actinomycetota
GAG
Leu
>WENV170549356
CXVA01000197
280702
Actinomycetota
GGC
Ala
>WENV170549357
CXVA01000225
60767
Actinomycetota
TGA
Ser
>WENV170549358
CXVA01000246
222475
Actinomycetota
CTT
Lys
>WENV170549361
CXVA01000267
280549
Actinomycetota
CAC
Val
>WENV170549360
CXVA01000267
468141
Actinomycetota
GAC
Val
>WENV170549363
CXVA01000299
176075
Actinomycetota
TCT
Arg
>WENV170549364
CXVA01000322
147829
Actinomycetota
TAA
Leu
>WENV170549365
CXVA01000398
179238
Actinomycetota
GAT
Ile
>WENV170549366
CXVA01000435
358727
Actinomycetota
CCG
Arg
>WENV170549367
CXVA01000466
176078
Actinomycetota
GGG
Pro
>WENV170549368
CXVA01000504
481233
Actinomycetota
CCC
Gly
>WENV170549369
CXVA01000526
280703
Actinomycetota
CCT
Arg
>WENV170549373
CXVA01000635
280549
Actinomycetota
CAC
Val
>WENV170549372
CXVA01000635
468141
Actinomycetota
GAC
Val
>WENV170549374
CXVA01000691
227544
Actinomycetota
TAC
Val
>WENV170549375
CXVA01000712
280498
Actinomycetota
GTT
Asn
>WENV170549376
CXVA01000712
280498
Actinomycetota
GTT
Asn
>WENV170549377
CXVA01000755
280702
Actinomycetota
GGC
Ala
>WENV170549378
CXVA01000755
280702
Actinomycetota
GGC
Ala
>WENV170549379
CXVA01000827
176077
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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