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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549382
CXVB01000008
434162
Actinomycetota
GAC
Val
>WENV170549383
CXVB01000008
280549
Actinomycetota
CAC
Val
>WENV170549384
CXVB01000012
60767
Actinomycetota
TGA
Ser
>WENV170549385
CXVB01000013
227544
Actinomycetota
TAC
Val
>WENV170549386
CXVB01000014
191955
Actinomycetota
TGT
Thr
>WENV170549387
CXVB01000015
280702
Actinomycetota
GGC
Ala
>WENV170549388
CXVB01000015
280702
Actinomycetota
GGC
Ala
>WENV170549389
CXVB01000015
175837
Actinomycetota
ACG
Arg
>WENV170549391
CXVB01000019
398948
Actinomycetota
TTC
Glu
>WENV170549393
CXVB01000024
280544
Actinomycetota
GTG
His
>WENV170549394
CXVB01000025
349164
Actinomycetota
CTC
Glu
>WENV170549395
CXVB01000025
430848
Actinomycetota
CTG
Gln
>WENV170549396
CXVB01000025
59689
Actinomycetota
GGA
Ser
>WENV170549398
CXVB01000027
295964
Actinomycetota
GTT
Asn
>WENV170549399
CXVB01000027
280498
Actinomycetota
GTT
Asn
>WENV170549402
CXVB01000027
434162
Actinomycetota
GAC
Val
>WENV170549403
CXVB01000027
280549
Actinomycetota
CAC
Val
>WENV170549405
CXVB01000027
176078
Actinomycetota
GGG
Pro
>WENV170549406
CXVB01000028
280450
Actinomycetota
TTT
Lys
>WENV170549407
CXVB01000028
222475
Actinomycetota
CTT
Lys
>WENV170549408
CXVB01000029
179238
Actinomycetota
GAT
Ile
>WENV170549409
CXVB01000029
280524
Actinomycetota
TGC
Ala
>WENV170549410
CXVB01000032
176075
Actinomycetota
TCT
Arg
>WENV170549412
CXVB01000033
176077
Actinomycetota
CAT
Met
>WENV170549413
CXVB01000033
280703
Actinomycetota
CCT
Arg
>WENV170549414
CXVB01000035
481233
Actinomycetota
CCC
Gly
>WENV170549415
CXVB01000035
99865
Actinomycetota
CAG
Leu
>WENV170549416
CXVB01000037
506175
Actinomycetota
TTG
Gln
>WENV170549417
CXVB01000037
175848
Actinomycetota
TGG
Pro
>WENV170549418
CXVB01000037
175843
Actinomycetota
CAA
Leu
>WENV170549419
CXVB01000038
20450
Actinomycetota
GAG
Leu
>WENV170549420
CXVB01000041
56451
Actinomycetota
CGA
Ser
>WENV170549421
CXVB01000044
117777
Actinomycetota
>WENV170549422
CXVB01000044
175949
Actinomycetota
CAT
Met
>WENV170549423
CXVB01000044
29393
Actinomycetota
GCT
Ser
>WENV170549424
CXVB01000055
323758
Actinomycetota
CGT
Thr
>WENV170549425
CXVB01000055
140768
Actinomycetota
TAG
Leu
>WENV170549426
CXVB01000056
147829
Actinomycetota
TAA
Leu
>WENV170549427
CXVB01000057
358727
Actinomycetota
CCG
Arg
>WENV170549429
CXVB01000132
175837
Actinomycetota
ACG
Arg
>WENV170549430
CXVB01000132
175837
Actinomycetota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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