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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549432
CXVC01000002
481233
Actinomycetota
CCC
Gly
>WENV170549431
CXVC01000002
99865
Actinomycetota
CAG
Leu
>WENV170549436
CXVC01000005
280549
Actinomycetota
CAC
Val
>WENV170549435
CXVC01000005
434162
Actinomycetota
GAC
Val
>WENV170549441
CXVC01000006
280549
Actinomycetota
CAC
Val
>WENV170549440
CXVC01000006
434162
Actinomycetota
GAC
Val
>WENV170549443
CXVC01000009
140768
Actinomycetota
TAG
Leu
>WENV170549442
CXVC01000009
323758
Actinomycetota
CGT
Thr
>WENV170549445
CXVC01000011
59689
Actinomycetota
GGA
Ser
>WENV170549444
CXVC01000011
280450
Actinomycetota
TTT
Lys
>WENV170549446
CXVC01000012
147829
Actinomycetota
TAA
Leu
>WENV170549453
CXVC01000012
175848
Actinomycetota
TGG
Pro
>WENV170549452
CXVC01000012
482604
Actinomycetota
TTG
Gln
>WENV170549450
CXVC01000012
175837
Actinomycetota
ACG
Arg
>WENV170549451
CXVC01000012
175837
Actinomycetota
ACG
Arg
>WENV170549448
CXVC01000012
280702
Actinomycetota
GGC
Ala
>WENV170549449
CXVC01000012
280702
Actinomycetota
GGC
Ala
>WENV170549447
CXVC01000012
175843
Actinomycetota
CAA
Leu
>WENV170549457
CXVC01000014
176077
Actinomycetota
CAT
Met
>WENV170549459
CXVC01000014
398948
Actinomycetota
TTC
Glu
>WENV170549458
CXVC01000014
280703
Actinomycetota
CCT
Arg
>WENV170549462
CXVC01000015
29393
Actinomycetota
GCT
Ser
>WENV170549460
CXVC01000015
117777
Actinomycetota
>WENV170549461
CXVC01000015
175949
Actinomycetota
CAT
Met
>WENV170549463
CXVC01000017
176075
Actinomycetota
TCT
Arg
>WENV170549464
CXVC01000017
280544
Actinomycetota
GTG
His
>WENV170549465
CXVC01000018
317680
Actinomycetota
CCG
Arg
>WENV170549468
CXVC01000022
280498
Actinomycetota
GTT
Asn
>WENV170549469
CXVC01000022
280498
Actinomycetota
GTT
Asn
>WENV170549470
CXVC01000022
176078
Actinomycetota
GGG
Pro
>WENV170549471
CXVC01000023
227544
Actinomycetota
TAC
Val
>WENV170549472
CXVC01000024
191955
Actinomycetota
TGT
Thr
>WENV170549473
CXVC01000026
222475
Actinomycetota
CTT
Lys
>WENV170549475
CXVC01000029
280524
Actinomycetota
TGC
Ala
>WENV170549474
CXVC01000029
179238
Actinomycetota
GAT
Ile
>WENV170549476
CXVC01000032
20450
Actinomycetota
GAG
Leu
>WENV170549477
CXVC01000034
56451
Actinomycetota
CGA
Ser
>WENV170549478
CXVC01000034
60767
Actinomycetota
TGA
Ser
>WENV170549480
CXVC01000052
430848
Actinomycetota
CTG
Gln
>WENV170549479
CXVC01000052
289788
Actinomycetota
CTC
Glu
>WENV170549481
CXVC01000237
175837
Actinomycetota
ACG
Arg
>WENV170549482
CXVC01000256
175843
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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