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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549510
CXVD01000228
481233
Actinomycetota
CCC
Gly
>WENV170549489
CXVD01000061
147829
Actinomycetota
TAA
Leu
>WENV170549509
CXVD01000222
280498
Actinomycetota
GTT
Asn
>WENV170549523
CXVD01000364
295964
Actinomycetota
GTT
Asn
>WENV170549493
CXVD01000079
140768
Actinomycetota
TAG
Leu
>WENV170549511
CXVD01000235
176075
Actinomycetota
TCT
Arg
>WENV170549520
CXVD01000335
175848
Actinomycetota
TGG
Pro
>WENV170549499
CXVD01000141
176078
Actinomycetota
GGG
Pro
>WENV170549526
CXVD01000392
59689
Actinomycetota
GGA
Ser
>WENV170549516
CXVD01000289
175837
Actinomycetota
ACG
Arg
>WENV170549517
CXVD01000289
175837
Actinomycetota
ACG
Arg
>WENV170549515
CXVD01000271
29393
Actinomycetota
GCT
Ser
>WENV170549504
CXVD01000186
280549
Actinomycetota
CAC
Val
>WENV170549507
CXVD01000186
280549
Actinomycetota
CAC
Val
>WENV170549524
CXVD01000392
349164
Actinomycetota
CTC
Glu
>WENV170549498
CXVD01000120
20450
Actinomycetota
GAG
Leu
>WENV170549494
CXVD01000096
280702
Actinomycetota
GGC
Ala
>WENV170549495
CXVD01000096
280702
Actinomycetota
GGC
Ala
>WENV170549503
CXVD01000186
434162
Actinomycetota
GAC
Val
>WENV170549506
CXVD01000186
434162
Actinomycetota
GAC
Val
>WENV170549518
CXVD01000313
398948
Actinomycetota
TTC
Glu
>WENV170549512
CXVD01000241
117777
Actinomycetota
>WENV170549513
CXVD01000241
175949
Actinomycetota
CAT
Met
>WENV170549487
CXVD01000040
227544
Actinomycetota
TAC
Val
>WENV170549488
CXVD01000054
280544
Actinomycetota
GTG
His
>WENV170549497
CXVD01000114
280703
Actinomycetota
CCT
Arg
>WENV170549491
CXVD01000074
280450
Actinomycetota
TTT
Lys
>WENV170549492
CXVD01000079
323758
Actinomycetota
CGT
Thr
>WENV170549508
CXVD01000214
358727
Actinomycetota
CCG
Arg
>WENV170549485
CXVD01000036
56451
Actinomycetota
CGA
Ser
>WENV170549500
CXVD01000150
99865
Actinomycetota
CAG
Leu
>WENV170549484
CXVD01000017
222475
Actinomycetota
CTT
Lys
>WENV170549483
CXVD01000014
175843
Actinomycetota
CAA
Leu
>WENV170549525
CXVD01000392
430848
Actinomycetota
CTG
Gln
>WENV170549514
CXVD01000262
179238
Actinomycetota
GAT
Ile
>WENV170549486
CXVD01000038
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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