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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549529
CXVE01000001
117777
Actinomycetota
>WENV170549530
CXVE01000001
175949
Actinomycetota
CAT
Met
>WENV170549531
CXVE01000001
29393
Actinomycetota
GCT
Ser
>WENV170549532
CXVE01000004
191955
Actinomycetota
TGT
Thr
>WENV170549533
CXVE01000009
56451
Actinomycetota
CGA
Ser
>WENV170549534
CXVE01000009
60767
Actinomycetota
TGA
Ser
>WENV170549535
CXVE01000010
175843
Actinomycetota
CAA
Leu
>WENV170549536
CXVE01000010
482604
Actinomycetota
TTG
Gln
>WENV170549537
CXVE01000010
175848
Actinomycetota
TGG
Pro
>WENV170549538
CXVE01000011
481233
Actinomycetota
CCC
Gly
>WENV170549539
CXVE01000011
99865
Actinomycetota
CAG
Leu
>WENV170549543
CXVE01000016
434162
Actinomycetota
GAC
Val
>WENV170549544
CXVE01000016
280549
Actinomycetota
CAC
Val
>WENV170549546
CXVE01000016
176078
Actinomycetota
GGG
Pro
>WENV170549547
CXVE01000016
280498
Actinomycetota
GTT
Asn
>WENV170549548
CXVE01000022
20450
Actinomycetota
GAG
Leu
>WENV170549549
CXVE01000024
280450
Actinomycetota
TTT
Lys
>WENV170549550
CXVE01000024
222475
Actinomycetota
CTT
Lys
>WENV170549551
CXVE01000025
147829
Actinomycetota
TAA
Leu
>WENV170549553
CXVE01000028
176077
Actinomycetota
CAT
Met
>WENV170549554
CXVE01000028
280703
Actinomycetota
CCT
Arg
>WENV170549555
CXVE01000029
280544
Actinomycetota
GTG
His
>WENV170549556
CXVE01000032
179238
Actinomycetota
GAT
Ile
>WENV170549557
CXVE01000032
280524
Actinomycetota
TGC
Ala
>WENV170549558
CXVE01000033
280702
Actinomycetota
GGC
Ala
>WENV170549559
CXVE01000033
280702
Actinomycetota
GGC
Ala
>WENV170549560
CXVE01000033
175837
Actinomycetota
ACG
Arg
>WENV170549561
CXVE01000033
175837
Actinomycetota
ACG
Arg
>WENV170549562
CXVE01000035
227544
Actinomycetota
TAC
Val
>WENV170549564
CXVE01000037
323758
Actinomycetota
CGT
Thr
>WENV170549565
CXVE01000037
140768
Actinomycetota
TAG
Leu
>WENV170549568
CXVE01000047
434162
Actinomycetota
GAC
Val
>WENV170549569
CXVE01000047
280549
Actinomycetota
CAC
Val
>WENV170549570
CXVE01000051
349003
Actinomycetota
CCG
Arg
>WENV170549572
CXVE01000057
176075
Actinomycetota
TCT
Arg
>WENV170549573
CXVE01000059
59689
Actinomycetota
GGA
Ser
>WENV170549574
CXVE01000059
349164
Actinomycetota
CTC
Glu
>WENV170549575
CXVE01000059
430848
Actinomycetota
CTG
Gln
>WENV170549577
CXVE01000061
398948
Actinomycetota
TTC
Glu
>WENV170549578
CXVE01000071
280498
Actinomycetota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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