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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549624
CXVF01000102
481233
Actinomycetota
CCC
Gly
>WENV170549613
CXVF01000051
147829
Actinomycetota
TAA
Leu
>WENV170549582
CXVF01000004
349003
Actinomycetota
CCG
Arg
>WENV170549585
CXVF01000006
280498
Actinomycetota
GTT
Asn
>WENV170549584
CXVF01000006
295964
Actinomycetota
GTT
Asn
>WENV170549623
CXVF01000081
140768
Actinomycetota
TAG
Leu
>WENV170549594
CXVF01000009
176075
Actinomycetota
TCT
Arg
>WENV170549610
CXVF01000043
175848
Actinomycetota
TGG
Pro
>WENV170549591
CXVF01000006
176078
Actinomycetota
GGG
Pro
>WENV170549609
CXVF01000043
482604
Actinomycetota
TTG
Gln
>WENV170549616
CXVF01000053
59689
Actinomycetota
GGA
Ser
>WENV170549597
CXVF01000021
175837
Actinomycetota
ACG
Arg
>WENV170549598
CXVF01000021
175837
Actinomycetota
ACG
Arg
>WENV170549605
CXVF01000039
29393
Actinomycetota
GCT
Ser
>WENV170549589
CXVF01000006
280549
Actinomycetota
CAC
Val
>WENV170549627
CXVF01000106
280549
Actinomycetota
CAC
Val
>WENV170549620
CXVF01000074
349164
Actinomycetota
CTC
Glu
>WENV170549600
CXVF01000026
20450
Actinomycetota
GAG
Leu
>WENV170549612
CXVF01000048
280702
Actinomycetota
GGC
Ala
>WENV170549611
CXVF01000048
280702
Actinomycetota
GGC
Ala
>WENV170549588
CXVF01000006
434162
Actinomycetota
GAC
Val
>WENV170549626
CXVF01000106
434162
Actinomycetota
GAC
Val
>WENV170549618
CXVF01000064
176077
Actinomycetota
CAT
Met
>WENV170549607
CXVF01000042
280524
Actinomycetota
TGC
Ala
>WENV170549614
CXVF01000052
398948
Actinomycetota
TTC
Glu
>WENV170549603
CXVF01000039
117777
Actinomycetota
>WENV170549604
CXVF01000039
175949
Actinomycetota
CAT
Met
>WENV170549595
CXVF01000012
227544
Actinomycetota
TAC
Val
>WENV170549601
CXVF01000028
191955
Actinomycetota
TGT
Thr
>WENV170549619
CXVF01000069
280544
Actinomycetota
GTG
His
>WENV170549579
CXVF01000001
280703
Actinomycetota
CCT
Arg
>WENV170549628
CXVF01000111
280450
Actinomycetota
TTT
Lys
>WENV170549622
CXVF01000081
323758
Actinomycetota
CGT
Thr
>WENV170549580
CXVF01000002
56451
Actinomycetota
CGA
Ser
>WENV170549602
CXVF01000030
99865
Actinomycetota
CAG
Leu
>WENV170549596
CXVF01000014
222475
Actinomycetota
CTT
Lys
>WENV170549608
CXVF01000043
175843
Actinomycetota
CAA
Leu
>WENV170549621
CXVF01000074
430848
Actinomycetota
CTG
Gln
>WENV170549606
CXVF01000042
179238
Actinomycetota
GAT
Ile
>WENV170549592
CXVF01000008
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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