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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549677
CXVH01000037
176640
Actinomycetota
TAC
Val
>WENV170549680
CXVH01000079
58099
Actinomycetota
TGA
Ser
>WENV170549681
CXVH01000097
29393
Actinomycetota
GCT
Ser
>WENV170549682
CXVH01000103
56451
Actinomycetota
CGA
Ser
>WENV170549685
CXVH01000110
280450
Actinomycetota
TTT
Lys
>WENV170549688
CXVH01000471
280703
Actinomycetota
CCT
Arg
>WENV170549690
CXVH01000493
191955
Actinomycetota
TGT
Thr
>WENV170549697
CXVH01000548
280544
Actinomycetota
GTG
His
>WENV170549698
CXVH01000587
176075
Actinomycetota
TCT
Arg
>WENV170549699
CXVH01000605
20450
Actinomycetota
GAG
Leu
>WENV170549700
CXVH01000606
280441
Actinomycetota
CCG
Arg
>WENV170549701
CXVH01000627
179238
Actinomycetota
GAT
Ile
>WENV170549703
CXVH01000808
147829
Actinomycetota
TAA
Leu
>WENV170549704
CXVH01000859
175837
Actinomycetota
ACG
Arg
>WENV170549706
CXVH01000897
280549
Actinomycetota
CAC
Val
>WENV170549709
CXVH01000938
482604
Actinomycetota
TTG
Gln
>WENV170549720
CXVH01001014
140768
Actinomycetota
TAG
Leu
>WENV170549719
CXVH01001014
280470
Actinomycetota
CGT
Thr
>WENV170549721
CXVH01001042
481233
Actinomycetota
CCC
Gly
>WENV170549722
CXVH01001091
184564
Actinomycetota
CTT
Lys
>WENV170549724
CXVH01001415
398948
Actinomycetota
TTC
Glu
>WENV170549725
CXVH01001416
280702
Actinomycetota
GGC
Ala
>WENV170549726
CXVH01001439
175848
Actinomycetota
TGG
Pro
>WENV170549728
CXVH01001470
398853
Actinomycetota
CTG
Gln
>WENV170549727
CXVH01001470
289788
Actinomycetota
CTC
Glu
>WENV170549731
CXVH01001581
175843
Actinomycetota
CAA
Leu
>WENV170549732
CXVH01001604
176077
Actinomycetota
CAT
Met
>WENV170549733
CXVH01001646
117777
Actinomycetota
>WENV170549734
CXVH01001646
175949
Actinomycetota
CAT
Met
>WENV170549735
CXVH01001705
280498
Actinomycetota
GTT
Asn
>WENV170549741
CXVH01001966
280549
Actinomycetota
CAC
Val
>WENV170549744
CXVH01002051
280549
Actinomycetota
CAC
Val
>WENV170549745
CXVH01002114
280702
Actinomycetota
GGC
Ala
>WENV170549765
CXVH01003088
99865
Actinomycetota
CAG
Leu
>WENV170549766
CXVH01003433
175837
Actinomycetota
ACG
Arg
>WENV170549767
CXVH01003585
398948
Actinomycetota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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