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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549862
CXVJ01000021
481233
Actinomycetota
CCC
Gly
>WENV170549859
CXVJ01000014
147829
Actinomycetota
TAA
Leu
>WENV170549836
CXVJ01000004
280498
Actinomycetota
GTT
Asn
>WENV170549837
CXVJ01000004
280498
Actinomycetota
GTT
Asn
>WENV170549824
CXVJ01000002
140768
Actinomycetota
TAG
Leu
>WENV170549849
CXVJ01000009
176075
Actinomycetota
TCT
Arg
>WENV170549858
CXVJ01000013
175848
Actinomycetota
TGG
Pro
>WENV170549835
CXVJ01000004
176078
Actinomycetota
GGG
Pro
>WENV170549857
CXVJ01000013
482604
Actinomycetota
TTG
Gln
>WENV170549820
CXVJ01000001
59689
Actinomycetota
GGA
Ser
>WENV170549854
CXVJ01000013
175837
Actinomycetota
ACG
Arg
>WENV170549855
CXVJ01000013
175837
Actinomycetota
ACG
Arg
>WENV170549844
CXVJ01000006
29393
Actinomycetota
GCT
Ser
>WENV170549833
CXVJ01000004
280549
Actinomycetota
CAC
Val
>WENV170549869
CXVJ01000041
280549
Actinomycetota
CAC
Val
>WENV170549856
CXVJ01000013
20450
Actinomycetota
GAG
Leu
>WENV170549852
CXVJ01000013
280702
Actinomycetota
GGC
Ala
>WENV170549853
CXVJ01000013
280702
Actinomycetota
GGC
Ala
>WENV170549832
CXVJ01000004
434162
Actinomycetota
GAC
Val
>WENV170549868
CXVJ01000041
434162
Actinomycetota
GAC
Val
>WENV170549839
CXVJ01000005
176077
Actinomycetota
CAT
Met
>WENV170549865
CXVJ01000023
280524
Actinomycetota
TGC
Ala
>WENV170549860
CXVJ01000019
398948
Actinomycetota
TTC
Glu
>WENV170549842
CXVJ01000006
117777
Actinomycetota
>WENV170549843
CXVJ01000006
175949
Actinomycetota
CAT
Met
>WENV170549848
CXVJ01000008
227544
Actinomycetota
TAC
Val
>WENV170549866
CXVJ01000031
191955
Actinomycetota
TGT
Thr
>WENV170549847
CXVJ01000008
280544
Actinomycetota
GTG
His
>WENV170549840
CXVJ01000005
280703
Actinomycetota
CCT
Arg
>WENV170549826
CXVJ01000002
280450
Actinomycetota
TTT
Lys
>WENV170549823
CXVJ01000002
323758
Actinomycetota
CGT
Thr
>WENV170549845
CXVJ01000006
56451
Actinomycetota
CGA
Ser
>WENV170549846
CXVJ01000006
58099
Actinomycetota
TGA
Ser
>WENV170549863
CXVJ01000021
99865
Actinomycetota
CAG
Leu
>WENV170549827
CXVJ01000002
222475
Actinomycetota
CTT
Lys
>WENV170549851
CXVJ01000013
175843
Actinomycetota
CAA
Leu
>WENV170549828
CXVJ01000002
317680
Actinomycetota
CCG
Arg
>WENV170549822
CXVJ01000001
430848
Actinomycetota
CTG
Gln
>WENV170549821
CXVJ01000001
289788
Actinomycetota
CTC
Glu
>WENV170549864
CXVJ01000023
179238
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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