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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550193
CXVQ01000060
481233
Actinomycetota
CCC
Gly
>WENV170550180
CXVQ01000039
147829
Actinomycetota
TAA
Leu
>WENV170550178
CXVQ01000038
280498
Actinomycetota
GTT
Asn
>WENV170550179
CXVQ01000038
280498
Actinomycetota
GTT
Asn
>WENV170550203
CXVQ01000111
140768
Actinomycetota
TAG
Leu
>WENV170550163
CXVQ01000015
176075
Actinomycetota
TCT
Arg
>WENV170550183
CXVQ01000044
175848
Actinomycetota
TGG
Pro
>WENV170550177
CXVQ01000038
176078
Actinomycetota
GGG
Pro
>WENV170550195
CXVQ01000062
59689
Actinomycetota
GGA
Ser
>WENV170550188
CXVQ01000048
175837
Actinomycetota
ACG
Arg
>WENV170550189
CXVQ01000048
175837
Actinomycetota
ACG
Arg
>WENV170550199
CXVQ01000067
29393
Actinomycetota
GCT
Ser
>WENV170550170
CXVQ01000029
280549
Actinomycetota
CAC
Val
>WENV170550175
CXVQ01000038
280549
Actinomycetota
CAC
Val
>WENV170550204
CXVQ01000182
280549
Actinomycetota
CAC
Val
>WENV170550207
CXVQ01000237
280549
Actinomycetota
CAC
Val
>WENV170550161
CXVQ01000010
349164
Actinomycetota
CTC
Glu
>WENV170550167
CXVQ01000026
20450
Actinomycetota
GAG
Leu
>WENV170550186
CXVQ01000048
280702
Actinomycetota
GGC
Ala
>WENV170550187
CXVQ01000048
280702
Actinomycetota
GGC
Ala
>WENV170550157
CXVQ01000006
176077
Actinomycetota
CAT
Met
>WENV170550160
CXVQ01000008
280524
Actinomycetota
TGC
Ala
>WENV170550185
CXVQ01000045
398948
Actinomycetota
TTC
Glu
>WENV170550197
CXVQ01000067
117777
Actinomycetota
>WENV170550198
CXVQ01000067
175949
Actinomycetota
CAT
Met
>WENV170550171
CXVQ01000033
227544
Actinomycetota
TAC
Val
>WENV170550192
CXVQ01000056
191955
Actinomycetota
TGT
Thr
>WENV170550166
CXVQ01000024
280544
Actinomycetota
GTG
His
>WENV170550158
CXVQ01000006
280703
Actinomycetota
CCT
Arg
>WENV170550190
CXVQ01000049
280450
Actinomycetota
TTT
Lys
>WENV170550169
CXVQ01000029
468141
Actinomycetota
GAC
Val
>WENV170550174
CXVQ01000038
468141
Actinomycetota
GAC
Val
>WENV170550202
CXVQ01000111
323758
Actinomycetota
CGT
Thr
>WENV170550153
CXVQ01000005
358727
Actinomycetota
CCG
Arg
>WENV170550164
CXVQ01000017
56451
Actinomycetota
CGA
Ser
>WENV170550194
CXVQ01000060
99865
Actinomycetota
CAG
Leu
>WENV170550191
CXVQ01000049
222475
Actinomycetota
CTT
Lys
>WENV170550182
CXVQ01000044
175843
Actinomycetota
CAA
Leu
>WENV170550162
CXVQ01000010
430848
Actinomycetota
CTG
Gln
>WENV170550159
CXVQ01000008
179238
Actinomycetota
GAT
Ile
>WENV170550200
CXVQ01000073
60767
Actinomycetota
TGA
Ser
>WENV170550201
CXVQ01000098
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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