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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550257
CXVS01000006
175837
Actinomycetota
ACG
Arg
>WENV170550258
CXVS01000105
480329
Actinomycetota
CCC
Gly
>WENV170550259
CXVS01000596
176723
Actinomycetota
TCT
Arg
>WENV170550260
CXVS01000889
358727
Actinomycetota
CCG
Arg
>WENV170550261
CXVS01001211
104211
Actinomycetota
CAG
Leu
>WENV170550262
CXVS01001308
280498
Actinomycetota
GTT
Asn
>WENV170550263
CXVS01001308
280498
Actinomycetota
GTT
Asn
>WENV170550268
CXVS01002179
459899
Actinomycetota
TTC
Glu
>WENV170550270
CXVS01002248
176555
Actinomycetota
CAT
Met
>WENV170550273
CXVS01002737
280489
Actinomycetota
CTC
Glu
>WENV170550274
CXVS01003045
56166
Actinomycetota
TGA
Ser
>WENV170550275
CXVS01003074
117903
Actinomycetota
GTA
Tyr
>WENV170550276
CXVS01003123
280523
Actinomycetota
GGC
Ala
>WENV170550277
CXVS01003172
147806
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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