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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180946973
ODUE01005365
280450
Actinomycetota
TTT
Lys
>WENV180947006
ODUE01007702
280499
Actinomycetota
CCT
Arg
>WENV180947014
ODUE01008365
176723
Actinomycetota
TCT
Arg
>WENV180947051
ODUE01010764
280498
Actinomycetota
GTT
Asn
>WENV180947055
ODUE01011158
280549
Actinomycetota
CAC
Val
>WENV180947113
ODUE01020636
480329
Actinomycetota
CCC
Gly
>WENV180947122
ODUE01024097
480376
Actinomycetota
CCC
Gly
>WENV180947146
ODUE01032250
280496
Actinomycetota
CGT
Thr
>WENV180947159
ODUE01039192
175882
Actinomycetota
TGG
Pro
>WENV180947162
ODUE01040259
117903
Actinomycetota
GTA
Tyr
>WENV180947179
ODUE01044476
280489
Actinomycetota
CTC
Glu
>WENV180947180
ODUE01044476
398853
Actinomycetota
CTG
Gln
>WENV180947200
ODUE01059050
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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