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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183509235
OMHH01001109
285875
Actinomycetota
TAC
Val
>WENV183509212
OMHH01000438
293206
Actinomycetota
GGT
Thr
>WENV183509245
OMHH01001879
351841
Actinomycetota
TGC
Ala
>WENV183509347
OMHH01013188
293195
Actinomycetota
TCT
Arg
>WENV183509288
OMHH01005429
74117
Actinomycetota
CAG
Leu
>WENV183509338
OMHH01011945
241571
Actinomycetota
CAT
Met
>WENV183509268
OMHH01003646
118695
Actinomycetota
TAG
Leu
>WENV183509244
OMHH01001879
184156
Actinomycetota
GAT
Ile
>WENV183509314
OMHH01008797
434575
Actinomycetota
CTG
Gln
>WENV183509224
OMHH01000855
180946
Actinomycetota
TTT
Lys
>WENV183509267
OMHH01003538
284889
Actinomycetota
CTC
Glu
>WENV183509305
OMHH01007241
281115
Actinomycetota
>WENV183509232
OMHH01001047
285874
Actinomycetota
TGT
Thr
>WENV183509297
OMHH01006826
30089
Actinomycetota
GCT
Ser
>WENV183509352
OMHH01015118
348441
Actinomycetota
GTG
His
>WENV183509243
OMHH01001726
480521
Actinomycetota
CCC
Gly
>WENV183509309
OMHH01007606
331024
Actinomycetota
CTT
Lys
>WENV183509211
OMHH01000427
285880
Actinomycetota
TCT
Arg
>WENV183509189
OMHH01000107
46668
Actinomycetota
GAG
Leu
>WENV183509285
OMHH01005196
399101
Actinomycetota
CAC
Val
>WENV183509323
OMHH01009500
280986
Actinomycetota
GAA
Phe
>WENV183509218
OMHH01000621
176353
Actinomycetota
CAA
Leu
>WENV183509270
OMHH01003691
180944
Actinomycetota
GTC
Asp
>WENV183509276
OMHH01003947
20643
Actinomycetota
GAG
Leu
>WENV183509207
OMHH01000280
402794
Actinomycetota
TCC
Gly
>WENV183509250
OMHH01002080
179433
Actinomycetota
TAA
Leu
>WENV183509315
OMHH01008797
285873
Actinomycetota
CTC
Glu
>WENV183509317
OMHH01009056
406406
Actinomycetota
CAC
Val
>WENV183509282
OMHH01005006
280976
Actinomycetota
CCG
Arg
>WENV183509193
OMHH01000118
280988
Actinomycetota
TAC
Val
>WENV183509213
OMHH01000438
293207
Actinomycetota
CAT
Met
>WENV183509228
OMHH01000954
481756
Actinomycetota
TCC
Gly
>WENV183509269
OMHH01003691
343259
Actinomycetota
TTC
Glu
>WENV183509187
OMHH01000031
287452
Actinomycetota
CGT
Thr
>WENV183509279
OMHH01004843
323011
Actinomycetota
CCT
Arg
>WENV183509240
OMHH01001522
296882
Actinomycetota
GTG
His
>WENV183509350
OMHH01014025
285877
Actinomycetota
CCG
Arg
>WENV183509293
OMHH01006013
186868
Actinomycetota
CAA
Leu
>WENV183509281
OMHH01004910
48117
Actinomycetota
GAG
Leu
>WENV183509272
OMHH01003815
131892
Actinomycetota
GTA
Tyr
>WENV183509274
OMHH01003815
180945
Actinomycetota
CAT
Met
>WENV183509284
OMHH01005196
434601
Actinomycetota
GAC
Val
>WENV183509257
OMHH01002429
292678
Actinomycetota
CTT
Lys
>WENV183509209
OMHH01000332
47028
Actinomycetota
GGA
Ser
>WENV183509333
OMHH01010636
59810
Actinomycetota
CGA
Ser
>WENV183509330
OMHH01009877
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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