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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183510702
OMHQ01003626
351841
Actinomycetota
TGC
Ala
>WENV183510649
OMHQ01000413
74117
Actinomycetota
CAG
Leu
>WENV183510765
OMHQ01009737
31036
Actinomycetota
GCT
Ser
>WENV183510677
OMHQ01001952
46948
Actinomycetota
>WENV183510736
OMHQ01006383
401853
Actinomycetota
GTT
Asn
>WENV183510743
OMHQ01007552
184156
Actinomycetota
GAT
Ile
>WENV183510653
OMHQ01000693
180946
Actinomycetota
TTT
Lys
>WENV183510694
OMHQ01003127
480521
Actinomycetota
CCC
Gly
>WENV183510684
OMHQ01002459
184493
Actinomycetota
GGG
Pro
>WENV183510673
OMHQ01001835
400702
Actinomycetota
CTG
Gln
>WENV183510646
OMHQ01000134
6108
Actinomycetota
TAT
Ile
>WENV183510666
OMHQ01001500
285880
Actinomycetota
TCT
Arg
>WENV183510665
OMHQ01001474
46668
Actinomycetota
GAG
Leu
>WENV183510683
OMHQ01002359
280986
Actinomycetota
GAA
Phe
>WENV183510689
OMHQ01002915
281635
Actinomycetota
GGC
Ala
>WENV183510659
OMHQ01001013
176353
Actinomycetota
CAA
Leu
>WENV183510669
OMHQ01001668
180944
Actinomycetota
GTC
Asp
>WENV183510766
OMHQ01009804
20643
Actinomycetota
GAG
Leu
>WENV183510711
OMHQ01004067
287476
Actinomycetota
CTT
Lys
>WENV183510680
OMHQ01002231
179433
Actinomycetota
TAA
Leu
>WENV183510651
OMHQ01000473
280988
Actinomycetota
TAC
Val
>WENV183510747
OMHQ01007858
186871
Actinomycetota
CTT
Lys
>WENV183510696
OMHQ01003288
312253
Actinomycetota
TGC
Ala
>WENV183510686
OMHQ01002596
481756
Actinomycetota
TCC
Gly
>WENV183510650
OMHQ01000430
285877
Actinomycetota
CCG
Arg
>WENV183510676
OMHQ01001898
287437
Actinomycetota
CCA
Trp
>WENV183510714
OMHQ01004360
131892
Actinomycetota
GTA
Tyr
>WENV183510664
OMHQ01001418
180945
Actinomycetota
CAT
Met
>WENV183510674
OMHQ01001835
302285
Actinomycetota
CTC
Glu
>WENV183510641
OMHQ01000020
47028
Actinomycetota
GGA
Ser
>WENV183510655
OMHQ01000760
293249
Actinomycetota
CAC
Val
>WENV183510695
OMHQ01003288
176317
Actinomycetota
GAT
Ile
>WENV183510675
OMHQ01001843
46947
Actinomycetota
TGA
Ser
>WENV183510723
OMHQ01004577
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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