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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183510835
OMHS01002349
449634
Actinomycetota
CTG
Gln
>WENV183510863
OMHS01006031
184156
Actinomycetota
GAT
Ile
>WENV183510846
OMHS01004376
480521
Actinomycetota
CCC
Gly
>WENV183510875
OMHS01007202
401852
Actinomycetota
TTG
Gln
>WENV183510850
OMHS01004591
184493
Actinomycetota
GGG
Pro
>WENV183510866
OMHS01006239
331024
Actinomycetota
CTT
Lys
>WENV183510832
OMHS01002266
480461
Actinomycetota
GCA
Cys
>WENV183510825
OMHS01001774
46668
Actinomycetota
GAG
Leu
>WENV183510834
OMHS01002266
399101
Actinomycetota
CAC
Val
>WENV183510864
OMHS01006126
280986
Actinomycetota
GAA
Phe
>WENV183510830
OMHS01002262
402794
Actinomycetota
TCC
Gly
>WENV183510883
OMHS01008054
280976
Actinomycetota
CCG
Arg
>WENV183510828
OMHS01002006
280988
Actinomycetota
TAC
Val
>WENV183510867
OMHS01006503
287452
Actinomycetota
CGT
Thr
>WENV183510881
OMHS01008040
399188
Actinomycetota
CAT
Met
>WENV183510882
OMHS01008040
287437
Actinomycetota
CCA
Trp
>WENV183510865
OMHS01006128
285879
Actinomycetota
GTG
His
>WENV183510833
OMHS01002266
434601
Actinomycetota
GAC
Val
>WENV183510836
OMHS01002349
302285
Actinomycetota
CTC
Glu
>WENV183510862
OMHS01005966
47028
Actinomycetota
GGA
Ser
>WENV183510880
OMHS01008040
280979
Actinomycetota
GGT
Thr
>WENV183510845
OMHS01004202
176317
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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