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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183517276
OMNP01000149
179231
Actinomycetota
TAC
Val
>WENV183517227
OMNP01000077
176499
Actinomycetota
CAT
Met
>WENV183517409
OMNP01000766
175883
Actinomycetota
GAT
Ile
>WENV183517216
OMNP01000060
280498
Actinomycetota
GTT
Asn
>WENV183517217
OMNP01000060
280498
Actinomycetota
GTT
Asn
>WENV183517405
OMNP01000729
280498
Actinomycetota
GTT
Asn
>WENV183517165
OMNP01000021
140768
Actinomycetota
TAG
Leu
>WENV183517909
OMNP01025024
176075
Actinomycetota
TCT
Arg
>WENV183517241
OMNP01000099
59689
Actinomycetota
GGA
Ser
>WENV183517156
OMNP01000016
175837
Actinomycetota
ACG
Arg
>WENV183517942
OMNP01031969
176641
Actinomycetota
CTT
Lys
>WENV183517224
OMNP01000076
280441
Actinomycetota
CCG
Arg
>WENV183517456
OMNP01001425
398843
Actinomycetota
GTT
Asn
>WENV183517939
OMNP01031453
176077
Actinomycetota
CAT
Met
>WENV183517195
OMNP01000043
176638
Actinomycetota
GGG
Pro
>WENV183517758
OMNP01011619
480374
Actinomycetota
TTG
Gln
>WENV183517739
OMNP01010206
291585
Actinomycetota
GCC
Gly
>WENV183517234
OMNP01000083
280523
Actinomycetota
GGC
Ala
>WENV183517963
OMNP01036135
175949
Actinomycetota
CAT
Met
>WENV183517183
OMNP01000038
175841
Actinomycetota
TAT
Ile
>WENV183517890
OMNP01023933
280536
Actinomycetota
CTT
Lys
>WENV183517858
OMNP01021926
280496
Actinomycetota
CGT
Thr
>WENV183517306
OMNP01000220
175872
Actinomycetota
GTC
Asp
>WENV183517155
OMNP01000015
20205
Actinomycetota
GCT
Ser
>WENV183517360
OMNP01000464
175926
Actinomycetota
CAT
Met
>WENV183517167
OMNP01000022
480329
Actinomycetota
CCC
Gly
>WENV183517573
OMNP01004293
483206
Actinomycetota
CTG
Gln
>WENV183517146
OMNP01000010
175882
Actinomycetota
TGG
Pro
>WENV183517147
OMNP01000010
20209
Actinomycetota
GAG
Leu
>WENV183517508
OMNP01002577
480319
Actinomycetota
TTG
Gln
>WENV183517162
OMNP01000021
280489
Actinomycetota
CTC
Glu
>WENV183517199
OMNP01000048
280499
Actinomycetota
CCT
Arg
>WENV183517163
OMNP01000021
398853
Actinomycetota
CTG
Gln
>WENV183517145
OMNP01000010
175843
Actinomycetota
CAA
Leu
>WENV183517261
OMNP01000132
203883
Actinomycetota
TCT
Arg
>WENV183517154
OMNP01000015
46642
Actinomycetota
CGA
Ser
>WENV183517168
OMNP01000022
104211
Actinomycetota
CAG
Leu
>WENV183517226
OMNP01000077
117903
Actinomycetota
GTA
Tyr
>WENV183517152
OMNP01000015
56071
Actinomycetota
TGA
Ser
>WENV183517264
OMNP01000136
147796
Actinomycetota
TAA
Leu
>WENV183517164
OMNP01000021
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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