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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183538896
OOAI01000049
323758
Actinomycetota
CGT
Thr
>WENV183538897
OOAI01000049
140768
Actinomycetota
TAG
Leu
>WENV183538898
OOAI01000049
280496
Actinomycetota
CGT
Thr
>WENV183538899
OOAI01000049
358727
Actinomycetota
CCG
Arg
>WENV183538901
OOAI01000049
434162
Actinomycetota
GAC
Val
>WENV183538902
OOAI01000049
280549
Actinomycetota
CAC
Val
>WENV183538918
OOAI01000070
175907
Actinomycetota
TAC
Val
>WENV183538923
OOAI01000076
179238
Actinomycetota
GAT
Ile
>WENV183538924
OOAI01000076
280524
Actinomycetota
TGC
Ala
>WENV183538925
OOAI01000076
191955
Actinomycetota
TGT
Thr
>WENV183538932
OOAI01000085
99865
Actinomycetota
CAG
Leu
>WENV183538954
OOAI01000111
349164
Actinomycetota
CTC
Glu
>WENV183538955
OOAI01000111
398853
Actinomycetota
CTG
Gln
>WENV183538956
OOAI01000111
59689
Actinomycetota
GGA
Ser
>WENV183538958
OOAI01000112
56075
Actinomycetota
TGA
Ser
>WENV183538981
OOAI01000138
176077
Actinomycetota
CAT
Met
>WENV183538982
OOAI01000138
280703
Actinomycetota
CCT
Arg
>WENV183538997
OOAI01000152
398947
Actinomycetota
CCA
Trp
>WENV183538999
OOAI01000152
20208
Actinomycetota
GAG
Leu
>WENV183539041
OOAI01000219
176075
Actinomycetota
TCT
Arg
>WENV183539042
OOAI01000220
280544
Actinomycetota
GTG
His
>WENV183539056
OOAI01000247
117777
Actinomycetota
>WENV183539057
OOAI01000247
175949
Actinomycetota
CAT
Met
>WENV183539058
OOAI01000247
29393
Actinomycetota
GCT
Ser
>WENV183539068
OOAI01000259
280498
Actinomycetota
GTT
Asn
>WENV183539069
OOAI01000259
280498
Actinomycetota
GTT
Asn
>WENV183539081
OOAI01000270
175837
Actinomycetota
ACG
Arg
>WENV183539082
OOAI01000270
175837
Actinomycetota
ACG
Arg
>WENV183539110
OOAI01000323
150272
Actinomycetota
TAA
Leu
>WENV183539118
OOAI01000348
176078
Actinomycetota
GGG
Pro
>WENV183539173
OOAI01000537
184157
Actinomycetota
TGG
Pro
>WENV183539174
OOAI01000537
175843
Actinomycetota
CAA
Leu
>WENV183539218
OOAI01000735
222475
Actinomycetota
CTT
Lys
>WENV183539219
OOAI01000736
506175
Actinomycetota
TTG
Gln
>WENV183539220
OOAI01000736
280702
Actinomycetota
GGC
Ala
>WENV183539238
OOAI01000819
56083
Actinomycetota
CGA
Ser
>WENV183539277
OOAI01001262
280524
Actinomycetota
TGC
Ala
>WENV183539278
OOAI01001262
280523
Actinomycetota
GGC
Ala
>WENV183539286
OOAI01001397
480329
Actinomycetota
CCC
Gly
>WENV183539310
OOAI01001833
480376
Actinomycetota
CCC
Gly
>WENV183539334
OOAI01002694
280499
Actinomycetota
CCT
Arg
>WENV183539338
OOAI01002865
398853
Actinomycetota
CTG
Gln
>WENV183539355
OOAI01004732
176499
Actinomycetota
CAT
Met
>WENV183539370
OOAI01005181
46642
Actinomycetota
CGA
Ser
>WENV183539435
OOAI01008978
176723
Actinomycetota
TCT
Arg
>WENV183539482
OOAI01020018
176642
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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