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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183541249
OOAK01007938
117777
Actinomycetota
>WENV183541240
OOAK01007194
175837
Actinomycetota
ACG
Arg
>WENV183541200
OOAK01005279
176642
Actinomycetota
CAA
Leu
>WENV183541314
OOAK01013421
175843
Actinomycetota
CAA
Leu
>WENV183541432
OOAK01037662
280549
Actinomycetota
CAC
Val
>WENV183541139
OOAK01003359
104211
Actinomycetota
CAG
Leu
>WENV183541138
OOAK01003331
176499
Actinomycetota
CAT
Met
>WENV183541328
OOAK01014244
176077
Actinomycetota
CAT
Met
>WENV183541250
OOAK01007938
175949
Actinomycetota
CAT
Met
>WENV183541205
OOAK01005595
176555
Actinomycetota
CAT
Met
>WENV183540939
OOAK01001054
480329
Actinomycetota
CCC
Gly
>WENV183541333
OOAK01014462
358727
Actinomycetota
CCG
Arg
>WENV183541130
OOAK01003168
280499
Actinomycetota
CCT
Arg
>WENV183541349
OOAK01015751
56083
Actinomycetota
CGA
Ser
>WENV183541117
OOAK01002917
46642
Actinomycetota
CGA
Ser
>WENV183541292
OOAK01011423
280496
Actinomycetota
CGT
Thr
>WENV183541326
OOAK01014198
280470
Actinomycetota
CGT
Thr
>WENV183541074
OOAK01002241
398853
Actinomycetota
CTG
Gln
>WENV183541005
OOAK01001604
222475
Actinomycetota
CTT
Lys
>WENV183541345
OOAK01015423
434162
Actinomycetota
GAC
Val
>WENV183541243
OOAK01007291
21508
Actinomycetota
GAG
Leu
>WENV183541199
OOAK01005236
29393
Actinomycetota
GCT
Ser
>WENV183541137
OOAK01003331
117903
Actinomycetota
GTA
Tyr
>WENV183541245
OOAK01007638
280498
Actinomycetota
GTT
Asn
>WENV183541293
OOAK01011721
295964
Actinomycetota
GTT
Asn
>WENV183541121
OOAK01002951
147806
Actinomycetota
TAA
Leu
>WENV183540932
OOAK01001021
237585
Actinomycetota
TAC
Val
>WENV183541327
OOAK01014198
140768
Actinomycetota
TAG
Leu
>WENV183541178
OOAK01004700
176723
Actinomycetota
TCT
Arg
>WENV183541070
OOAK01002193
280524
Actinomycetota
TGC
Ala
>WENV183541207
OOAK01005689
191955
Actinomycetota
TGT
Thr
>WENV183541408
OOAK01028111
398948
Actinomycetota
TTC
Glu
>WENV183541277
OOAK01009707
480319
Actinomycetota
TTG
Gln
>WENV183540940
OOAK01001068
280450
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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