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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183543594
OOAO01000002
147806
Actinomycetota
TAA
Leu
>WENV183543593
OOAO01000002
175837
Actinomycetota
ACG
Arg
>WENV183543598
OOAO01000002
176638
Actinomycetota
GGG
Pro
>WENV183543609
OOAO01000005
176499
Actinomycetota
CAT
Met
>WENV183543605
OOAO01000005
140768
Actinomycetota
TAG
Leu
>WENV183543610
OOAO01000005
56166
Actinomycetota
TGA
Ser
>WENV183543602
OOAO01000005
280489
Actinomycetota
CTC
Glu
>WENV183543603
OOAO01000005
398853
Actinomycetota
CTG
Gln
>WENV183543611
OOAO01000005
46642
Actinomycetota
CGA
Ser
>WENV183543608
OOAO01000005
117903
Actinomycetota
GTA
Tyr
>WENV183543604
OOAO01000005
280470
Actinomycetota
CGT
Thr
>WENV183543620
OOAO01000009
237585
Actinomycetota
TAC
Val
>WENV183543646
OOAO01000024
480319
Actinomycetota
TTG
Gln
>WENV183543720
OOAO01000085
280450
Actinomycetota
TTT
Lys
>WENV183543773
OOAO01000121
280524
Actinomycetota
TGC
Ala
>WENV183543774
OOAO01000121
280523
Actinomycetota
GGC
Ala
>WENV183543770
OOAO01000121
480329
Actinomycetota
CCC
Gly
>WENV183543771
OOAO01000121
104211
Actinomycetota
CAG
Leu
>WENV183543866
OOAO01000226
176555
Actinomycetota
CAT
Met
>WENV183543950
OOAO01000400
280498
Actinomycetota
GTT
Asn
>WENV183543949
OOAO01000400
280523
Actinomycetota
GGC
Ala
>WENV183544011
OOAO01000534
358727
Actinomycetota
CCG
Arg
>WENV183544079
OOAO01000723
280499
Actinomycetota
CCT
Arg
>WENV183544101
OOAO01000755
175882
Actinomycetota
TGG
Pro
>WENV183544100
OOAO01000755
176642
Actinomycetota
CAA
Leu
>WENV183544103
OOAO01000763
459899
Actinomycetota
TTC
Glu
>WENV183544108
OOAO01000776
176723
Actinomycetota
TCT
Arg
>WENV183544411
OOAO01002831
280503
Actinomycetota
CCT
Arg
>WENV183544452
OOAO01003310
175883
Actinomycetota
GAT
Ile
>WENV183544476
OOAO01003632
241064
Actinomycetota
CTC
Glu
>WENV183544610
OOAO01006923
291585
Actinomycetota
GCC
Gly
>WENV183544615
OOAO01007273
280536
Actinomycetota
CTT
Lys
>WENV183544622
OOAO01007765
175926
Actinomycetota
CAT
Met
>WENV183544690
OOAO01013055
483206
Actinomycetota
CTG
Gln
>WENV183544712
OOAO01015988
398843
Actinomycetota
GTT
Asn
>WENV183544713
OOAO01015988
398843
Actinomycetota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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