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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183547806
OOAW01000139
117777
Actinomycetota
>WENV183547662
OOAW01000041
175837
Actinomycetota
ACG
Arg
>WENV183547663
OOAW01000041
175837
Actinomycetota
ACG
Arg
>WENV183547688
OOAW01000056
176642
Actinomycetota
CAA
Leu
>WENV183547982
OOAW01000479
175843
Actinomycetota
CAA
Leu
>WENV183547636
OOAW01000028
280549
Actinomycetota
CAC
Val
>WENV183547940
OOAW01000341
280549
Actinomycetota
CAC
Val
>WENV183547535
OOAW01000003
176499
Actinomycetota
CAT
Met
>WENV183547617
OOAW01000024
176077
Actinomycetota
CAT
Met
>WENV183547807
OOAW01000139
175949
Actinomycetota
CAT
Met
>WENV183547539
OOAW01000003
176555
Actinomycetota
CAT
Met
>WENV183548032
OOAW01000687
480329
Actinomycetota
CCC
Gly
>WENV183548028
OOAW01000676
480376
Actinomycetota
CCC
Gly
>WENV183547633
OOAW01000028
317680
Actinomycetota
CCG
Arg
>WENV183547732
OOAW01000076
317680
Actinomycetota
CCG
Arg
>WENV183547618
OOAW01000024
280703
Actinomycetota
CCT
Arg
>WENV183547565
OOAW01000008
280499
Actinomycetota
CCT
Arg
>WENV183547613
OOAW01000024
56083
Actinomycetota
CGA
Ser
>WENV183547542
OOAW01000003
46642
Actinomycetota
CGA
Ser
>WENV183547639
OOAW01000028
280496
Actinomycetota
CGT
Thr
>WENV183547637
OOAW01000028
323758
Actinomycetota
CGT
Thr
>WENV183547530
OOAW01000003
280470
Actinomycetota
CGT
Thr
>WENV183548119
OOAW01001360
289788
Actinomycetota
CTC
Glu
>WENV183547529
OOAW01000003
398853
Actinomycetota
CTG
Gln
>WENV183548120
OOAW01001360
398853
Actinomycetota
CTG
Gln
>WENV183547632
OOAW01000028
222475
Actinomycetota
CTT
Lys
>WENV183547635
OOAW01000028
434162
Actinomycetota
GAC
Val
>WENV183547800
OOAW01000127
20208
Actinomycetota
GAG
Leu
>WENV183547876
OOAW01000228
179238
Actinomycetota
GAT
Ile
>WENV183547808
OOAW01000139
29393
Actinomycetota
GCT
Ser
>WENV183547937
OOAW01000332
59689
Actinomycetota
GGA
Ser
>WENV183547909
OOAW01000271
280702
Actinomycetota
GGC
Ala
>WENV183547910
OOAW01000271
280702
Actinomycetota
GGC
Ala
>WENV183547793
OOAW01000118
280523
Actinomycetota
GGC
Ala
>WENV183548103
OOAW01001154
280523
Actinomycetota
GGC
Ala
>WENV183547942
OOAW01000341
176078
Actinomycetota
GGG
Pro
>WENV183547767
OOAW01000096
176638
Actinomycetota
GGG
Pro
>WENV183547534
OOAW01000003
117903
Actinomycetota
GTA
Tyr
>WENV183547743
OOAW01000084
280544
Actinomycetota
GTG
His
>WENV183547719
OOAW01000069
280498
Actinomycetota
GTT
Asn
>WENV183547978
OOAW01000473
280498
Actinomycetota
GTT
Asn
>WENV183548061
OOAW01000787
280498
Actinomycetota
GTT
Asn
>WENV183548062
OOAW01000787
280498
Actinomycetota
GTT
Asn
>WENV183548217
OOAW01002355
295964
Actinomycetota
GTT
Asn
>WENV183547687
OOAW01000056
147806
Actinomycetota
TAA
Leu
>WENV183547984
OOAW01000483
150272
Actinomycetota
TAA
Leu
>WENV183547564
OOAW01000008
179231
Actinomycetota
TAC
Val
>WENV183547804
OOAW01000131
175907
Actinomycetota
TAC
Val
>WENV183547531
OOAW01000003
140768
Actinomycetota
TAG
Leu
>WENV183547638
OOAW01000028
140768
Actinomycetota
TAG
Leu
>WENV183547837
OOAW01000165
176075
Actinomycetota
TCT
Arg
>WENV183547956
OOAW01000388
203883
Actinomycetota
TCT
Arg
>WENV183547536
OOAW01000003
56166
Actinomycetota
TGA
Ser
>WENV183547614
OOAW01000024
56075
Actinomycetota
TGA
Ser
>WENV183547792
OOAW01000118
280524
Actinomycetota
TGC
Ala
>WENV183547877
OOAW01000228
280524
Actinomycetota
TGC
Ala
>WENV183547911
OOAW01000271
175848
Actinomycetota
TGG
Pro
>WENV183547689
OOAW01000056
175882
Actinomycetota
TGG
Pro
>WENV183548020
OOAW01000607
191955
Actinomycetota
TGT
Thr
>WENV183547619
OOAW01000024
398948
Actinomycetota
TTC
Glu
>WENV183547908
OOAW01000271
482604
Actinomycetota
TTG
Gln
>WENV183547665
OOAW01000042
480319
Actinomycetota
TTG
Gln
>WENV183547544
OOAW01000003
280450
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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