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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183548860
OOAY01002564
179231
Actinomycetota
TAC
Val
>WENV183548871
OOAY01002896
176499
Actinomycetota
CAT
Met
>WENV183548919
OOAY01005921
280498
Actinomycetota
GTT
Asn
>WENV183548856
OOAY01002414
459899
Actinomycetota
TTC
Glu
>WENV183548917
OOAY01005719
176639
Actinomycetota
CGG
Pro
>WENV183548936
OOAY01009600
380862
Actinomycetota
CAC
Val
>WENV183548933
OOAY01009585
349164
Actinomycetota
CTC
Glu
>WENV183548914
OOAY01005316
117881
Actinomycetota
TAG
Leu
>WENV183548889
OOAY01003776
56153
Actinomycetota
GGA
Ser
>WENV183548935
OOAY01009600
468141
Actinomycetota
GAC
Val
>WENV183548923
OOAY01006292
175882
Actinomycetota
TGG
Pro
>WENV183548925
OOAY01006789
480319
Actinomycetota
TTG
Gln
>WENV183548934
OOAY01009585
398853
Actinomycetota
CTG
Gln
>WENV183548926
OOAY01006938
176642
Actinomycetota
CAA
Leu
>WENV183548870
OOAY01002896
117903
Actinomycetota
GTA
Tyr
>WENV183548913
OOAY01005316
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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