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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183554325
OOBM01003961
235174
Actinomycetota
TGC
Ala
>WENV183554328
OOBM01004018
235101
Actinomycetota
TTT
Lys
>WENV183554349
OOBM01005119
166493
Actinomycetota
CTT
Lys
>WENV183554351
OOBM01005172
254857
Actinomycetota
CCG
Arg
>WENV183554396
OOBM01007359
338148
Actinomycetota
CTG
Gln
>WENV183554425
OOBM01009383
144595
Actinomycetota
CAA
Leu
>WENV183554426
OOBM01009851
23370
Actinomycetota
GCT
Ser
>WENV183554429
OOBM01010031
121510
Actinomycetota
TAA
Leu
>WENV183554438
OOBM01011604
113601
Actinomycetota
TAG
Leu
>WENV183554437
OOBM01011604
235121
Actinomycetota
CGT
Thr
>WENV183554455
OOBM01013603
47164
Actinomycetota
GGA
Ser
>WENV183554483
OOBM01019887
144823
Actinomycetota
TCT
Arg
>WENV183554486
OOBM01020108
235348
Actinomycetota
CCT
Arg
>WENV183554500
OOBM01022540
413665
Actinomycetota
TTG
Gln
>WENV183554525
OOBM01025872
235148
Actinomycetota
GTT
Asn
>WENV183554534
OOBM01028542
238473
Actinomycetota
GTG
His
>WENV183554540
OOBM01031195
80622
Actinomycetota
CAG
Leu
>WENV183554554
OOBM01032406
338239
Actinomycetota
TTC
Glu
>WENV183554573
OOBM01040248
235149
Actinomycetota
CCT
Arg
>WENV183554599
OOBM01050799
176456
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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